CN181635

Overview
NameCN181635
Unique NameCN181635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32
Identity = 73/175 (41.71%), Postives = 95/175 (54.29%), Query Frame = -2
Query:  140 AARIWARTNCQFDGAGRGRCQTGDC-GGLLQCQAY-GSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCN-----SGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 622
            + R WART C  D +G+  C+T DC  G L C    G PP TLAEF +      DF D+S +DGFN+PM  +   G G  ++  C A++   CP+EL+  G       C   C  F   ++CC        KC PT +S+ F E+CPDAYSY  DD   +FTC GG NY + FCP
Sbjct:   68 SGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.271e-31
Identity = 71/173 (41.04%), Postives = 90/173 (52.02%), Query Frame = -2
Query:  140 RIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 616
            R WART C  D +G+  C T DC  G + C   G+ PP TLAEF +      DF D+S +DGFN+PM  +   G G  +   C A++   CP+EL+  G       C   C  F T ++CC   +     C PT +S  F   CPDAYSY  DD    FTC GG NY + FCP
Sbjct:   73 RFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31
Identity = 77/195 (39.49%), Postives = 98/195 (50.26%), Query Frame = -2
Query:  140 GGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQ-AYGSPPNTLAEFALNQFQN-LDFIDISNIDGFNVPMEFSSVSGGCN-RVIRCTADIVRQCPNELRV------PGGCNGPCPVFKTEEHCC-----NSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 682
            GG  L  G+   L V P   + R+W R  C FD  GRG C TGDCGG+L+C  A G+ P T+ E  L    + + F D+S +DGFN P+  ++V GG       C AD+   CP+ L V        GC   C     + +CC     +   C PT FS  FK  CP AYSY  DDATS+  C     Y + FCP
Sbjct:   57 GGFHLGAGEEAALEV-PAGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.723e-30
Identity = 67/179 (37.43%), Postives = 92/179 (51.40%), Query Frame = -2
Query:  140 PGTKAARIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 634
            P   + R W RT C  D AG+  C+T DCG G + C   G+ PP TL E  +      D+ D+S +DGFN+PM  +   G G  +   C A++   CP +L+V         C   C  F   ++CC         C PT++S  F+++CP AYSY  DD  S FTC GG +Y + FCP
Sbjct:   34 PSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.169e-30
Identity = 67/179 (37.43%), Postives = 92/179 (51.40%), Query Frame = -2
Query:  140 PGTKAARIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 634
            P   + R W RT C  D AG+  C+T DCG G + C   G+ PP TL E  +      D+ D+S +DGFN+PM  +   G G  +   C A++ + CP  L+V         C   C  F   ++CC         C PT++S  F+++CP AYSY  DD  S FTC GG +Y + FCP
Sbjct:   68 PSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.374e-29
Identity = 66/173 (38.15%), Postives = 95/173 (54.91%), Query Frame = -2
Query:  140 RIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSG-----KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 616
            R WART C  + +G+  C+T DC  G + C   G+ PP +L E  +   + +DF D+S +DG+N+P+  ++  G G  +   C A++   CP EL+V G       C   C  F   ++CC         C  TK+SR FK++CP AYSY  DD+TS FTC G  +Y + FCP
Sbjct:   72 RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29
Identity = 73/187 (39.04%), Postives = 90/187 (48.13%), Query Frame = -2
Query:  140 AAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 697
            AA P GGG +L  GQ W +NV  GT + R+W RT C FDG+GRG C TGDC G L C   G  P TLAEF +   Q  DF D+S IDG+NV M FS           C++ +   C +                                      RCPDAY +P+D+ T    C G +NY+VVFCP
Sbjct:   42 AATPVGGGVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIGGSQ--DFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHACSGNSNYQVVFCP 177          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29
Identity = 68/179 (37.99%), Postives = 89/179 (49.72%), Query Frame = -2
Query:  140 PGTKAARIWARTNCQFDGAGRGRCQTGDCG-GLLQCQAYGS-PPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSG-GCNRVIRCTADIVRQCPNELRVPGG------CNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 634
            P   + R + RT C  D +G+  C T DCG G + C   G+ PP TL E  +      DF D+S +DGFN+PM  +   G G  +   C ADI + CP  L+V G       C   C  F   ++CC         C P  +S+ FK +CP AYSY  DD +S FTC G   Y + FCP
Sbjct:   68 PSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.337e-27
Identity = 73/187 (39.04%), Postives = 85/187 (45.45%), Query Frame = -2
Query:  140 AAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 697
            A +P GGG  L  GQ   +NV  GT+A RIWART C F+G G G CQTGDCGG L C   G PP TLAEF +      DF DIS IDGFN+ M+FS  +G   +                                   C    C P           P AY +P D AT    C G  NY++ FCP
Sbjct:   36 AGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQ-----------------------------------CRDPSCPP-----------PQAYQHPNDVAT--HACSGNNNYQITFCP 173          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.089e-26
Identity = 73/187 (39.04%), Postives = 85/187 (45.45%), Query Frame = -2
Query:  140 AAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 697
            A +P GGG  L  GQ   +NV  GT+A RIWART C F+G G G CQTGDCGG L C   G PP TLAEF +      DF DIS IDGFN+ M+FS  +G   +                                   C    C P           P AY +P D AT    C G  NY++ FCP
Sbjct:   36 AGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQ-----------------------------------CRDPSCPP-----------PQAYQHPNDVAT--HACSGNNNYQITFCP 173          
The following BLAST results are available for this feature:
BLAST of CN181635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP2_PRUPE2.265e-3241.71Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP_PRUAV3.271e-3141.04Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLPH_ORYSJ7.287e-3139.49Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TP1B_MALDO4.723e-3037.43Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TP1A_MALDO6.169e-3037.43Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_CASSA1.374e-2938.15Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP_ORYSJ3.061e-2939.04Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP1_PRUPE6.820e-2937.99Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
PR1A_HORVU8.337e-2739.04Pathogenesis-related protein 1A/1B OS=Hordeum vulg... [more]
PR1C_HORVU1.089e-2639.04Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181635 ID=CN181635; Name=CN181635; organism=Citrus sinensis; type=EST; length=698bp
GAGGATTTATTAATGTGACGCGGCTTGAAGCCACAAAGGCAAATTAAAGC
CTTATTCCTTACACATAGATTGCAGCGACCATACAACGTATAGCAGATAA
TTCCAACCAACAAATGATAGGCAGCTGACTCAGTCTTCACGGGCAGAACA
CAACCTTATAATTAGTCCCACCAGGACAAGTGAAAACGCTTGTTGCATCA
TCTTTAGGGTAACTATAAGCATCCGGGCACCTTTCCTTGAAAAACCTGGA
GAATTTTGTAGGTCCACATTTGCCTGAATTGCAACAGTGCTCTTCGGTCT
TGAACACGGGACATGGCCCATTACATCCTCCTGGAACCCTCAATTCATTC
GGGCACTGCCTGACAATATCAGCCGTACATCTAATCACACGGTTGCATCC
TCCGGACACCGAACTGAATTCCATAGGAACATTAAACCCATCAATGTTCG
AAATATCAATAAAATCCAAGTTTTGGAACTGGTTTAGTGCAAATTCAGCT
AAGGTGTTGGGGGGTGAGCCATAGGCTTGACATTGGAGTAGTCCCCCACA
GTCACCAGTCTGGCACCGCCCGCGCCCGGCTCCATCGAATTGGCAGTTGG
TCCTAGCCCAGATGCGGGCTGCCTTGGTGCCGGGGTTGACATTAAGGGGC
CAGTTTTGGCCCCGGTCGAGTCTCCTGCCTCCACCTGGCACTGCTGCA
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