CN181632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_LARHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=dxs PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23 Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = -2 Query: 276 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 752 + D P+ R+PRG G G P T L +G+G + +G +AIL +GS+V + AA+ L + +VAD RF KPLDT LIRQLA HE+L+TVEE V GG GS V L +GI + + ++ LPD Y++HG PA L + GL + I +V Sbjct: 462 LHDGPTAVRYPRGTGPGC--EPVAAMTALPLGQGTLRRQGKGIAILAFGSMVHPALAAADQLDA-----SVADMRFVKPLDTALIRQLAASHELLVTVEENVVMGGTGSAVLETLAAAGI---TVPVLNLGLPDHYVEHGDPALLLADCGLDTAGIVRSV 611
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_PSEPK (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida (strain KT2440) GN=dxs PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = -2 Query: 258 PSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 740 P+ R+PRG G A P + PLEIGKG + +G++VA+L +G VQ LA M ++ I+ TV D RF KPLD L+ +LA HE+L+T+EE ++ GG G+ V FL +L L L LPD Y++H PA L E GL + I A+V + + R Sbjct: 477 PAAVRYPRGTGPNA--PISGDLQPLEIGKGVVRRQGEKVALLVFG--VQ---LAEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVLKPLLHLG---LPDIYVEHAKPAQMLAECGLDAAGIEASVKARMAR 628
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_PSEFS (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=dxs PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 67/156 (42.95%), Postives = 91/156 (58.33%), Query Frame = -2 Query: 276 PSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 740 P+ R+PRGNG AV+ + + P+EIGKG + +G + A L +G VQ LA + ++ I TV D RF KPLD L+R++A HE+L+TVEE ++ GG G+ V FL IL L L LPD Y++H PA L E GL I A+V Sbjct: 478 PAAVRYPRGNGPNAVIEKDLE--PIEIGKGIVRRQGSKTAFLVFG--VQ---LAEALKVAEKIDATVVDMRFVKPLDEALVREIAGGHELLVTVEENAIMGGAGAAVSEFLARENILKSVLHLG---LPDVYVEHAKPAQMLAECGLDEAGIEASV 623
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_PSEA7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=dxs PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = -2 Query: 258 DRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 746 D P+ R+PRG+G + P+ + P+EIGKG + G +VA+L +G VQ LA M ++ + TVAD RF KPLD L+R+LA HE+L+++EE +V GG GS V FL G+ + L + LPD Y++H P++ L E GL + I V L R Sbjct: 473 DGPAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGKVALLVFG--VQ---LAEAMKVAEGLDATVADMRFVKPLDEALVRELAGSHELLVSIEENAVMGGAGSAVGEFLAREGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAVRQRLDR 626
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_PROM4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=dxs PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 65/164 (39.63%), Postives = 91/164 (55.49%), Query Frame = -2 Query: 261 DDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 749 +D P R PRG+G G L PL+IG+G IL +GD + IL YGS+V V A +LK IS TV +ARF +PLD LI LA ++T+EEG++ GGFGS V + +L +L +PD+ +DH SP E GL+ +S +++ G Sbjct: 467 NDGPCALRIPRGSGEGVTLMEEG-WEPLKIGRGEILEDGDDLLILAYGSMVTPAVQTAELLKQAGISSTVVNARFLRPLDQALIHPLARRIGKVVTIEEGALGGGFGSAVVESFSDQDLLVPTFRLG---IPDKLVDHASPQQSKESLGLTPSQMSKSIMKRYG 626
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_PSESM (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. tomato GN=dxs PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23 Identity = 70/164 (42.68%), Postives = 96/164 (58.54%), Query Frame = -2 Query: 261 PSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV---LSLLG 740 P+ R+PRG G AV+ N P+EIGKG + +G VAIL +G VQ LA ++ ++ + TV D RF KPLD L+R+ A HE+L+T+EE +V GG G+ V FL + IL L L LPD Y++H PA L E GL + I A + L+L+G Sbjct: 478 PAAVRYPRGTGPNAVIEANLD--PVEIGKGVVRRQGQGVAILVFG--VQ---LAEALVVAEKLDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARANILKSVLHLG---LPDVYVEHAKPAQMLAECGLDAEGIEAAINERLALIG 631
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_CYAP4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxs PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23 Identity = 66/165 (40.00%), Postives = 94/165 (56.97%), Query Frame = -2 Query: 255 DRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRP 746 D P R+PRGNG G L PL IGK +L +GD + +L YGS+V + AA +L+ I+ TV +ARF KPLDT+LI LA + ++TVEEG +GGFGS V L IL + + + +PD ++H +P + GL+S I+ VL+ +P Sbjct: 467 DGPIGLRYPRGNGYGVALMEEG-WEPLPIGKAEVLRQGDDLLMLAYGSMVYPTLQAAEILREHGIAATVVNARFAKPLDTELILPLAEKLGRVVTVEEGCLIGGFGSAVLEALQDQEIL---VPVTRIGIPDILVEHATPDQSKAQLGLTSAQIAERVLAKTQQP 627
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS2_GEOMG (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxs2 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23 Identity = 68/169 (40.24%), Postives = 96/169 (56.80%), Query Frame = -2 Query: 240 RPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALL 743 RP R+PRG G G LP + LEIG+G +L EGD VAI+ GS V AA +L+++ I TV +ARF KPLD +LI A ++TVEE ++ GGFGS V L G+ D ++ + + +PDR+I+ G ++ GL I+ATV + L +A L Sbjct: 467 RPVALRYPRGAGYG--LPLDQTIQSLEIGRGELLTEGDDVAIVAIGSTVYPAQEAAKLLEARGIRATVVNARFVKPLDRELILGAARRTGCIVTVEENALQGGFGSAVLELLADEGMTD--VRAKRIGIPDRFIEQGPQPQLRKDLGLDGAGIAATVEAFLTAKGQAAL 631
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_PSEU5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas stutzeri (strain A1501) GN=dxs PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.873e-23 Identity = 67/165 (40.61%), Postives = 94/165 (56.97%), Query Frame = -2 Query: 258 PSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV---LSLLGR 740 P+ R+PRG+G A + P + PLEIGK + G +VA+L +G + + + + L + TV D RF KPLD L+R+LA HE+L+TVEE S+ GG GS V FL G+L L L LPD Y++H P++ L E GL + I V L+ LG+ Sbjct: 477 PAAVRYPRGSGPNASIEPALE--PLEIGKAVVRRRGSKVALLVFGVQLPEALQVGDALDA-----TVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLAAEGVLRPILHLG---LPDYYVEHAKPSEMLAECGLDAAGIEVAVRKRLAALGK 631
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_VIBSL (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio splendidus (strain LGP32) GN=dxs PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23 Identity = 65/168 (38.69%), Postives = 101/168 (60.12%), Query Frame = -2 Query: 258 PSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME------GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 740 PS R+PRGNG+G + ++ T LEIGKGRI+ E G +VAIL +G+ ++ + A+ I TVAD RF KPLD LI+QLA +H++L+T+EE ++ GG G+ V FL +L + + ++ LPD++I G+ + EE GL ++ I ++ L + Sbjct: 470 PSAVRYPRGNGMGTEI--QSEFTALEIGKGRIVRESKKAKDGSKVAILSFGTFLESALQTADA-----IDATVADMRFVKPLDEALIKQLAADHDVLVTIEENAIAGGAGAGVIEFLMQEKLL---MPVLNLGLPDKFIAQGTQDELHEELGLDAKGIEKSISDYLAK 627 The following BLAST results are available for this feature:
BLAST of CN181632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 448
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181632 ID=CN181632; Name=CN181632; organism=Citrus sinensis; type=EST; length=753bpback to top |