CN181631

Overview
NameCN181631
Unique NameCN181631
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2302 contig Csv1_Contig2302:101..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK2_SALTY (Pyruvate kinase II OS=Salmonella typhimurium GN=pykA PE=3 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 76/214 (35.51%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNL-GVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTST 672
            +Q+ +I   RQLN+ VI A+Q++ESM+  P PTRAEV DV+ AV    DA+MLS E+A G +  + V+    A +R+ L +  E   S    + +L +   D + E I   A+  AN+L GV AI   T+ G  A + SR     PIFA +  + T     L  GV PV  + + D      + ++L++ KG +  GD V+V      + V ST
Sbjct:  265 IQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVA----AMARVCLGA--EKIPSINVSKHRL-DVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSAADGVVAAHEAVNLLRDKGYLVSGDLVIVTQGDVMSTVGST 471          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 74/219 (33.79%), Postives = 110/219 (50.23%), Query Frame = 1
Query:   37 QEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIA-------EQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVN------LSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTP 654
            Q+++I  C +  KPVI A+Q+LESM++ P PTRAE +DV+ AV   AD +MLSGE+A G +  +AV +  + +   E          A     QL E L  R+A       E     AV+ +      AI V TK G  A  ++R RP  PI A T +  T    +L  G+ PVL         ++D++  +   +++ K +G  K GD V+V+    P
Sbjct:  310 QKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAE----------AAIYHLQLFEELR-RLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRP 517          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK_STAAW (Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 67/221 (30.32%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGE-SLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 693
            VQ+ +I  C +L KPVI A+Q+L+SM   P  TRAE +DV+ A+    DA+MLSGE+A G + ++AV  ++  +   E     ++ +  L  + +L E SL + I   + + A+    NL V AI   T+ G  A  +S+ RP+  I A T  + T    ++ WGV PV+       +  +   +      G V  GD +++   +      +T    I +
Sbjct:  258 VQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAE---AAQDYKKLLSDRTKLVETSLVNAIGISVAHTAL----NLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVSNGDLIIITAGVPTGETGTTNMMKIHL 471          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK_STAAS (Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 67/221 (30.32%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGE-SLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 693
            VQ+ +I  C +L KPVI A+Q+L+SM   P  TRAE +DV+ A+    DA+MLSGE+A G + ++AV  ++  +   E     ++ +  L  + +L E SL + I   + + A+    NL V AI   T+ G  A  +S+ RP+  I A T  + T    ++ WGV PV+       +  +   +      G V  GD +++   +      +T    I +
Sbjct:  258 VQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAE---AAQDYKKLLSDRTKLVETSLVNAIGISVAHTAL----NLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVSNGDLIIITAGVPTGETGTTNMMKIHL 471          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK_STAAN (Pyruvate kinase OS=Staphylococcus aureus (strain N315) GN=pyk PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 67/221 (30.32%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGE-SLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 693
            VQ+ +I  C +L KPVI A+Q+L+SM   P  TRAE +DV+ A+    DA+MLSGE+A G + ++AV  ++  +   E     ++ +  L  + +L E SL + I   + + A+    NL V AI   T+ G  A  +S+ RP+  I A T  + T    ++ WGV PV+       +  +   +      G V  GD +++   +      +T    I +
Sbjct:  258 VQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAE---AAQDYKKLLSDRTKLVETSLVNAIGISVAHTAL----NLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVSNGDLIIITAGVPTGETGTTNMMKIHL 471          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK_STAAM (Pyruvate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pyk PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 67/221 (30.32%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGE-SLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 693
            VQ+ +I  C +L KPVI A+Q+L+SM   P  TRAE +DV+ A+    DA+MLSGE+A G + ++AV  ++  +   E     ++ +  L  + +L E SL + I   + + A+    NL V AI   T+ G  A  +S+ RP+  I A T  + T    ++ WGV PV+       +  +   +      G V  GD +++   +      +T    I +
Sbjct:  258 VQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAE---AAQDYKKLLSDRTKLVETSLVNAIGISVAHTAL----NLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVSNGDLIIITAGVPTGETGTTNMMKIHL 471          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK_STAAC (Pyruvate kinase OS=Staphylococcus aureus (strain COL) GN=pyk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 67/221 (30.32%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGE-SLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 693
            VQ+ +I  C +L KPVI A+Q+L+SM   P  TRAE +DV+ A+    DA+MLSGE+A G + ++AV  ++  +   E     ++ +  L  + +L E SL + I   + + A+    NL V AI   T+ G  A  +S+ RP+  I A T  + T    ++ WGV PV+       +  +   +      G V  GD +++   +      +T    I +
Sbjct:  258 VQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAE---AAQDYKKLLSDRTKLVETSLVNAIGISVAHTAL----NLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVSNGDLIIITAGVPTGETGTTNMMKIHL 471          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 67/221 (30.32%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGE-SLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 693
            VQ+ +I  C +L KPVI A+Q+L+SM   P  TRAE +DV+ A+    DA+MLSGE+A G + ++AV  ++  +   E     ++ +  L  + +L E SL + I   + + A+    NL V AI   T+ G  A  +S+ RP+  I A T  + T    ++ WGV PV+       +  +   +      G V  GD +++   +      +T    I +
Sbjct:  258 VQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAE---AAQDYKKLLSDRTKLVETSLVNAIGISVAHTAL----NLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVSNGDLIIITAGVPTGETGTTNMMKIHL 471          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 67/221 (30.32%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGE-SLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQV 693
            VQ+ +I  C +L KPVI A+Q+L+SM   P  TRAE +DV+ A+    DA+MLSGE+A G + ++AV  ++  +   E     ++ +  L  + +L E SL + I   + + A+    NL V AI   T+ G  A  +S+ RP+  I A T  + T    ++ WGV PV+       +  +   +      G V  GD +++   +      +T    I +
Sbjct:  258 VQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAE---AAQDYKKLLSDRTKLVETSLVNAIGISVAHTAL----NLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVSNGDLIIITAGVPTGETGTTNMMKIHL 471          
BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.297e-20
Identity = 75/218 (34.40%), Postives = 107/218 (49.08%), Query Frame = 1
Query:   37 QEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRI------AEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVN------LSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTP 654
            Q+++I  C    KPV+ A+Q+LESM+    PTRAE +DV+ AV   AD +MLSGE+A G F  +AV ++Q A +R            A    RQL E L           E     AV+ +      AI V TK G  A LLS+ RP   + A T        ++L  GV P+L         +DD++  +   I+  K++G ++ GD V+VV    P
Sbjct:  353 QKMMIGRCNLAGKPVVCATQMLESMITKARPTRAETSDVANAVLDGADCIMLSGETAKGSFPVEAV-MMQHAIAR---------EAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSQYRPRAAVIAVTRSAQAARQVHLSRGVFPLLYREPPEAIWADDVDRRVQFGIESGKLRGFLRVGDLVIVVTGWRP 560          
The following BLAST results are available for this feature:
BLAST of CN181631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
KPYK2_SALTY1.031e-2035.51Pyruvate kinase II OS=Salmonella typhimurium GN=py... [more]
KPYM_HUMAN1.347e-2033.79Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYK_STAAW1.759e-2030.32Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAS1.759e-2030.32Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAN1.759e-2030.32Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAAM1.759e-2030.32Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAC1.759e-2030.32Pyruvate kinase OS=Staphylococcus aureus (strain C... [more]
KPYK_STAA81.759e-2030.32Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAA31.759e-2030.32Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYR_RAT2.297e-2034.40Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D23_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181631 ID=CN181631; Name=CN181631; organism=Citrus sinensis; type=EST; length=757bp
TTGGAGTTGAATTCCACTTGAACAGATTCCACAGTCCAAGAAATAATTAT
TCACGTGTGCAGGCAACTAAACAAGCCAGTGATTGTAGCTTCTCAACTTC
TTGAGTCAATGGTTGAATATCCAACTCCAACACGTGCTGAGGTTGCAGAT
GTTTCTGAAGCAGTTAGACAATATGCAGATGCCTTGATGTTGTCTGGAGA
ATCTGCAATTGGACCATTTGGACAGAAGGCTGTCTCTGTCCTGCAGATGG
CCAGTAGTCGAATGGAACTATGGAGTCGTGAGGAAAACCGACAAAGTGCT
CTTTGTGGACAGCGTCAGTTAGGTGAATCACTGCATGATCGCATTGCTGA
GCAGATCTGCAATTGCGCTGTTGATATGGCTAACAACCTCGGAGTGGATG
CCATTTTTGTCTATACTAAGCATGGCCATATGGCGTCTCTTCTGTCCCGC
AACCGTCCAAACCCTCCCATATTTGCATTCACAAATGATGACAGCACCCG
GATGGCTCTGAACTTGCAATGGGGGGTTATTCCCGTACTAGTCAATTTAT
CAGATGACATGGAAACTAACATCGCGAAAACCATAGATCTTATAAAAATG
AAGGGGATGGTGAAATACGGGGATGCTGTTCTAGTAGTCTTGGATTTAAC
TCCAGCTCATGTTACTTCAACAGCATTCCAATCAATCCAGGTGAAGACAA
TCGTTTAGGGTAAAACTTTCTTAGGGGAAAACAAAAAGTATGTGCTGTCA
AATGCTA
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