CN181631

Overview
NameCN181631
Unique NameCN181631
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2302 contig Csv1_Contig2302:101..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN181631 vs. ExPASy Swiss-Prot
Match: KPYK_SACCA (Pyruvate kinase OS=Saccharomyces castellii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13
Identity = 63/219 (28.77%), Postives = 99/219 (45.21%), Query Frame = 1 
Query:   34 VQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLG-ESLHDRI----------AEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPV------LVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVV 639
            VQ+ +I       KPVI A+Q+LESM   P PTRAEV+DV  A+   AD +MLSGE+A G +   AV+ +                 +AL  ++ +  + L+D +           E +   AV         AI V +  G    L+S+ RP+ PI   T +       +L  GV P       + + ++D+E  +   I+     G++K GD  + +
Sbjct:  280 VQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTM---------------ADTALIAEQAIAYQPLYDDLRNLTPKPTSTTETVAASAVAAVYEQKAKAIIVLSTSGTTPRLVSKYRPDCPIILVTRNPRAARFSHLSRGVFPFVYEADSVADWTEDVELRLKFGIEKAIEMGVMKKGDTYVSI 483
The following BLAST results are available for this feature:
BLAST of CN181631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
KPYK_SACCA2.720e-1328.77Pyruvate kinase OS=Saccharomyces castellii GN=PYK1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D23_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181631 ID=CN181631; Name=CN181631; organism=Citrus sinensis; type=EST; length=757bp
TTGGAGTTGAATTCCACTTGAACAGATTCCACAGTCCAAGAAATAATTAT
TCACGTGTGCAGGCAACTAAACAAGCCAGTGATTGTAGCTTCTCAACTTC
TTGAGTCAATGGTTGAATATCCAACTCCAACACGTGCTGAGGTTGCAGAT
GTTTCTGAAGCAGTTAGACAATATGCAGATGCCTTGATGTTGTCTGGAGA
ATCTGCAATTGGACCATTTGGACAGAAGGCTGTCTCTGTCCTGCAGATGG
CCAGTAGTCGAATGGAACTATGGAGTCGTGAGGAAAACCGACAAAGTGCT
CTTTGTGGACAGCGTCAGTTAGGTGAATCACTGCATGATCGCATTGCTGA
GCAGATCTGCAATTGCGCTGTTGATATGGCTAACAACCTCGGAGTGGATG
CCATTTTTGTCTATACTAAGCATGGCCATATGGCGTCTCTTCTGTCCCGC
AACCGTCCAAACCCTCCCATATTTGCATTCACAAATGATGACAGCACCCG
GATGGCTCTGAACTTGCAATGGGGGGTTATTCCCGTACTAGTCAATTTAT
CAGATGACATGGAAACTAACATCGCGAAAACCATAGATCTTATAAAAATG
AAGGGGATGGTGAAATACGGGGATGCTGTTCTAGTAGTCTTGGATTTAAC
TCCAGCTCATGTTACTTCAACAGCATTCCAATCAATCCAGGTGAAGACAA
TCGTTTAGGGTAAAACTTTCTTAGGGGAAAACAAAAAGTATGTGCTGTCA
AATGCTA
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