CN188652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.269e-60 Identity = 108/162 (66.67%), Postives = 134/162 (82.72%), Query Frame = 3 Query: 204 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 A Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+A Sbjct: 29 AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSA 190
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 3.269e-60 Identity = 108/162 (66.67%), Postives = 134/162 (82.72%), Query Frame = 3 Query: 204 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 A Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+A Sbjct: 29 AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSA 190
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.512e-60 Identity = 108/159 (67.92%), Postives = 136/159 (85.53%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA+DHI+NSAAK++YMS GQ+ PIVFRGPNGAA+ V AQHSQ YAA Y+ +PGLKV++PYS+ED +GL+ A Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITA 160
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.614e-59 Identity = 108/159 (67.92%), Postives = 133/159 (83.65%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ PIVFRGPNGAA+ V AQHSQ Y A Y+ VPGLKV++PYS+ED +GL+ A Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTA 160
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.721e-59 Identity = 106/159 (66.67%), Postives = 134/159 (84.28%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA+ V AQHSQ Y A Y+ +PGLKV++PYS+ED +GL+ A Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTA 160
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 6.165e-59 Identity = 109/159 (68.55%), Postives = 133/159 (83.65%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 Q +REAL A+ EEM D +VF+MGEEV EYQGAYK+++GLL+++G RV+DTPI+E GF+GIGVGAA GL+PV+EFMT NFSMQAIDHIINSAAK++YMS GQ+ PIVFRGPNGAA VGAQH+Q + WYA+VPGL VL+PY + DA+GLLKAA Sbjct: 138 QQTLREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAA 296
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.996e-58 Identity = 105/159 (66.04%), Postives = 133/159 (83.65%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA+ V AQHSQ Y A Y+ +PGLKV++PYS+ED +GL+ A Sbjct: 2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTA 160
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.996e-58 Identity = 105/159 (66.04%), Postives = 133/159 (83.65%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA+ V AQHSQ Y A Y+ +PGLKV++PYS+ED +GL+ A Sbjct: 2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTA 160
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.088e-55 Identity = 105/169 (62.13%), Postives = 129/169 (76.33%), Query Frame = 3 Query: 183 NLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 ++R +S + VR+ALN+ALDEE+ D +VFL+GEEV +Y GAYKISKGL +KYG R+ DTPITE G+ VGAA GL+P+ EFM+ NFSMQ IDHIINSAAK++YMS+G+ VPIVFRG NGAA GV QHSQ + AW+ PG+KV+ PY EDARGLLKAA Sbjct: 23 SVRRLASGTLNVTVRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVPIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAA 191
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.579e-38 Identity = 73/161 (45.34%), Postives = 111/161 (68.94%), Query Frame = 3 Query: 207 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 + + ++ EALN + EE+ DPKVF++GE++G Y G+YK++KGL EKYG R+LDTPI E FTGI +GAA GL+P++E M F + A + I N+A +Y S G + P+V RGP G +GA+HSQ +++ SVPGL++++ + +A+GL+K+A Sbjct: 1 MSEKLLYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTPLVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSA 161 The following BLAST results are available for this feature:
BLAST of CN188652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188652 ID=CN188652; Name=CN188652; organism=Citrus sinensis; type=EST; length=690bpback to top |