CN188652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.693e-38 Identity = 76/159 (47.80%), Postives = 108/159 (67.92%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 ++++ EAL ALDEEM DP V +MGE+VG Y G+YK++KG EKYG R+LDTPI E FTG+ +GAA GL+P+VE M F + A + I N+A +Y S G +PIV RGP G +GA+HSQ +++ SVPGL++++ + + +GLLK+A Sbjct: 3 EVLLFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIPIVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSA 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.999e-38 Identity = 78/159 (49.06%), Postives = 110/159 (69.18%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 ++ + EAL A+DEEM+ D +VF++GE+VG Y G+YK++K L KYG RVLDTPI E FTG+ +GAA GLKPVVE M +F + A + I N+A +Y S G S+P+V RGP G + A+HSQ A++ +VPGLK+++ + +A+GLLKAA Sbjct: 4 KLFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIPLVIRGPGGIGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAA 162
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_STAPU (Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum GN=pdhB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38 Identity = 75/161 (46.58%), Postives = 109/161 (67.70%), Query Frame = 3 Query: 207 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 + +M++ EAL L EEM DPKV +MGE+VG Y G+YK++KG EKYG R+LDTPI E FTG+ +GAA GL+PVVE M F + A + I N+A +Y S ++PIV RGP G +GA+HSQ +++ SVPGL++++ + +A+GL+K++ Sbjct: 1 MSEMLLFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTIPIVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSS 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_ZYGCR (Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema circumcarinatum GN=pdhB PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37 Identity = 74/159 (46.54%), Postives = 109/159 (68.55%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 ++++ EAL L EEM DP+V +MGE+VG Y G+YK++KG E+YG R+LDTPI E FTG+ +GAA GL+PVVE M F + A + I N+A +Y S G ++PIV RGP G +GA+HSQ +++ SVPGL++++ + +A+GL+K+A Sbjct: 3 EVLLFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTIPIVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSA 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 73/161 (45.34%), Postives = 110/161 (68.32%), Query Frame = 3 Query: 207 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 + ++ + +AL +A DEEM+ DP V ++GE+VG Y G+YK++K L KYG RVLDTPI E FTG+ +GAA GL+P+VE M +F + A + I N+A Y S G ++P+V RGP G +GA+HSQ A++ ++PGLK+++ + +A+GLLK+A Sbjct: 1 MSKIFMFDALRAATDEEMAKDPTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSA 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 73/159 (45.91%), Postives = 106/159 (66.67%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 ++++ +AL A DEEM D VF++GE+VG Y G+YK++K L KYG RVLDTPI E F G+ +GAA GL+P+VE M +F + A + I N+A Y S G +PIV RGP G +GA+HSQ A++ ++PGLK+++ + +A+GLLK+A Sbjct: 3 EVLMFDALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFMGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIPIVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSA 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_CYACA (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium caldarium GN=pdhB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.134e-35 Identity = 71/161 (44.10%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 207 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 + M + EAL +A+DEEM D VF++GE+VG Y G+YK++K L KYG RVLD PI E FTG+ +GAA GL+P+VE M F + A + I N+ + Y S G ++P+V RGP G + A+HSQ + + S+PGL++++ ++ +A+GLLK+A Sbjct: 1 MSMMFLYEALRAAIDEEMGKDSNVFIVGEDVGHYGGSYKVTKDLHVKYGDLRVLDAPIAENSFTGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNIPVVIRGPGGIGKQLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSA 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35 Identity = 72/161 (44.72%), Postives = 108/161 (67.08%), Query Frame = 3 Query: 207 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 + ++ + +AL +A DEEM D V ++GE+VG Y G+YK++K L KYG RVLDTPI E FTG+ +GAA GL+P+VE M +F + A + I N+A Y S G ++P+V RGP G +GA+HSQ A++ ++PGLK+++ + +A+GLLK+A Sbjct: 1 MSKVFMFDALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSA 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.359e-34 Identity = 70/154 (45.45%), Postives = 100/154 (64.94%), Query Frame = 3 Query: 228 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 +A+N A+ EEM D +VF++GE+VG G +K + GL E++G ERV+DTP+ E+ G+G+GAA YG++P+ E +F M A++ II+ AAK Y S+ S PIV R P G HSQ A +A+ PGLK++ P + DA+GLLKAA Sbjct: 8 DAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVGIGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCPIVVRAPYGGGVHGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAA 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33 Identity = 69/158 (43.67%), Postives = 102/158 (64.56%), Query Frame = 3 Query: 216 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 M + +ALN ALDEEM+ DP+V ++GE+VG+ G + +++GLL+KYGP+RV+DTP++EA G +G A +GL+PV E ++ D +++ AK Y S GQ + P+V R P+G G HSQ A + GLKV++ + DA+GLLKAA Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAA 161 The following BLAST results are available for this feature:
BLAST of CN188652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188652 ID=CN188652; Name=CN188652; organism=Citrus sinensis; type=EST; length=690bpback to top |