CN188652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23 Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLL 680 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D + A++ + S G P+ R P G H+ A PGLKV+ P DA+GLL Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLL 158
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23 Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLL 680 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D + A++ + S G P+ R P G H+ A PGLKV+ P DA+GLL Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLL 158
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23 Identity = 53/159 (33.33%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 213 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 QM + +A+ AL E+ D V + GE+VG G ++ ++GL +++G +RV DTP+ E+G G+ +G G +PV+E F F + +D + A+ Y S G+ + P+ R P G H+ A PG+KV+ P + DA+GLL +A Sbjct: 3 QMTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESGIGGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMARMRYRSGGRWTSPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISA 161
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODBB_BOVIN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus GN=BCKDHB PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21 Identity = 56/158 (35.44%), Postives = 85/158 (53.80%), Query Frame = 3 Query: 210 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV-PIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLL 680 ++M + +A+ SALD ++ DP + GE+V + G ++ + GL +KYG +RV +TP+ E G G G+G A G + E ++ A D I+N AAK Y S + + R P G HSQ A++A PG+KV+ P S A+GLL Sbjct: 69 QKMNLFQAVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLL 225
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODBB_RAT (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21 Identity = 55/158 (34.81%), Postives = 85/158 (53.80%), Query Frame = 3 Query: 210 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV-PIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLL 680 ++M + +++ SALD ++ DP + GE+V + G ++ + GL +KYG +RV +TP+ E G G G+G A G + E ++ A D I+N AAK Y S + + R P G HSQ A++A PG+KV+ P S A+GLL Sbjct: 67 QKMNLFQSITSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLL 223
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODBB_MOUSE (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus GN=Bckdhb PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21 Identity = 55/158 (34.81%), Postives = 85/158 (53.80%), Query Frame = 3 Query: 210 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV-PIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLL 680 ++M + +++ SALD ++ DP + GE+V + G ++ + GL +KYG +RV +TP+ E G G G+G A G + E ++ A D I+N AAK Y S + + R P G HSQ A++A PG+KV+ P S A+GLL Sbjct: 67 QKMNLFQSITSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLL 223
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODBB_HUMAN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21 Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 189 RNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV-PIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLL 680 R Y K M + +++ SALD ++ DP + GE+V + G ++ + GL +KYG +RV +TP+ E G G G+G A G + E ++ A D I+N AAK Y S + + R P G HSQ A++A PG+KV+ P S A+GLL Sbjct: 63 REYGQTQK-MNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLL 225 The following BLAST results are available for this feature:
BLAST of CN188652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188652 ID=CN188652; Name=CN188652; organism=Citrus sinensis; type=EST; length=690bpback to top |