CN181628

Overview
NameCN181628
Unique NameCN181628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: DPP6_BOVIN (Dipeptidyl aminopeptidase-like protein 6 OS=Bos taurus GN=DPP6 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.205e-19
Identity = 58/205 (28.29%), Postives = 97/205 (47.32%), Query Frame = -2
Query:  183 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXSAITLARFPD----VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVYKMKGK-LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 782
            Y  L+ V G P  Q V + +   V      + S G +V K D RG+  +G +    ++   G ++ +DQ+     ++K+       +           S   L    D    VF C  + +P+T +  Y + ++E+Y+GL   D   YE + V H V  ++G+  L++H   DE +HF+HTA LI  L+  +  Y + I+PDE H
Sbjct:  620 YPLLLVVDGTPGSQSVAEKF--AVTWETVMVSSHGAVVVKCDGRGSGFQGTRLLHEVRRRLGSLEEKDQMEAVRVMLKEPYIDKTRVAVFGKDYGGYLSTYLLPAKGDGQAPVFSCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMAKVAHRVSALEGQQFLVIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESH 822          
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: DPF1_CAEEL (Dipeptidyl peptidase family member 1 OS=Caenorhabditis elegans GN=dpf-1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.528e-17
Identity = 57/201 (28.36%), Postives = 105/201 (52.24%), Query Frame = -2
Query:  183 LISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK--QGLAKVGHIXXXXXXXXXXXSAITLARFPD-VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVYKMKG-KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 773
            ++ VYGGP  Q   ++    + +      +    + ++D RG+  RG K+ ++I    G ++ EDQ+   + +++  + L     +           +   +   P+  F+CAVS APVT++  YD  YTE+YMG    D     YS V   +   K  +LLL+HG++D+NVHF+++A LI+ L      ++++++P++ H
Sbjct:  580 IVHVYGGPNDQNTKEA--TQIGIEEVVASASQAAILRIDGRGSGGRGWKYRSAIYGQLGTVEVEDQIKAIKVVLRLYRHLLDARRVAVFGWSYGGFMTLSMVNEAPEQFFKCAVSVAPVTNFAYYDATYTERYMG----DAPLESYSDVTKKLDNFKSTRLLLMHGLLDDNVHFQNSAILIDELQNRGVDFDLMVYPNQAH 774          
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: DAP2_YEAST (Dipeptidyl aminopeptidase B OS=Saccharomyces cerevisiae GN=DAP2 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.996e-17
Identity = 64/225 (28.44%), Postives = 107/225 (47.56%), Query Frame = -2
Query:  120 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXSAITLARFPDV-FQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVYKM--KGKLLLVHGMIDENVHFRHTARLINAL-VAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 782
            Y      YGGP  Q V  ++  +V            +V  +D RGT  +G  F + ++   G  +A DQ++ A             I           +  TL +     F+  +S APVT W  YD+ YTE+YM  P E+  GY  SSV H+V  +    + LL+HG  D+NVHF+++ + ++ L +   + Y++ +FPD  H  R H   + + +++ ++ +R
Sbjct:  589 YPVFFFAYGGPNSQQVVKTF--SVGFNEVVASQLNAIVVVVDGRGTGFKGQDFRSLVRDRLGDYEARDQISAASLYGSLTFVDPQKISLFGWSYGGYLTLKTLEKDGGRHFKYGMSVAPVTDWRFYDSVYTERYMHTPQENFDGYVESSV-HNVTALAQANRFLLMHGTGDDNVHFQNSLKFLDLLDLNGVENYDVHVFPDSDHSIRYHNANVIVFDKLLDWAKR 810          
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: DPP6_PANTR (Dipeptidyl aminopeptidase-like protein 6 OS=Pan troglodytes GN=DPP6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.447e-17
Identity = 56/205 (27.32%), Postives = 95/205 (46.34%), Query Frame = -2
Query:  183 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXSAITLARFPD----VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVYKMKGK-LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 782
            Y  L+ V G P  Q V + +   V      + S G +V K D RG+  +G K    ++   G ++ +DQ+     ++K+       +           S   L    +     F C  + +P+T +  Y + ++E+Y+GL   D   YE + V H V  ++ +  L++H   DE +HF+HTA LI  L+  +  Y + I+PDE H
Sbjct:  560 YPLLLVVDGTPGSQSVAEKF--EVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESH 762          
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: DPP6_HUMAN (Dipeptidyl aminopeptidase-like protein 6 OS=Homo sapiens GN=DPP6 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.447e-17
Identity = 56/205 (27.32%), Postives = 95/205 (46.34%), Query Frame = -2
Query:  183 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXSAITLARFPD----VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVYKMKGK-LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 782
            Y  L+ V G P  Q V + +   V      + S G +V K D RG+  +G K    ++   G ++ +DQ+     ++K+       +           S   L    +     F C  + +P+T +  Y + ++E+Y+GL   D   YE + V H V  ++ +  L++H   DE +HF+HTA LI  L+  +  Y + I+PDE H
Sbjct:  622 YPLLLVVDGTPGSQSVAEKF--EVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESH 824          
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: STE13_YEAST (Dipeptidyl aminopeptidase A OS=Saccharomyces cerevisiae GN=STE13 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.808e-17
Identity = 60/226 (26.55%), Postives = 111/226 (49.12%), Query Frame = -2
Query:  126 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGH----IXXXXXXXXXXXSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGY-EYSSVMH-HVYKMKGKLLLVHGMIDENVHFRHTARLINAL-VAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 782
            Y  L+++YGGP  Q       +++      +    ++V +++ RGT  +G  F +  +   G  +  D     +  I++    +      I             + L    D F+ A++ APVT+W  YD+ YTE+YM  PSE+  GY E S++ +   ++   +L +VHG  D+NVH ++T RL++ L +     Y++ IFPD  H  R H  +  + ++++ ++
Sbjct:  693 YPILVNIYGGPGSQTFTTK--SSLAFEQAVVSGLDVIVLQIEPRGTGGKGWSFRSWAREKLGYWEPRDITEVTKKFIQRNSQHIDESKIAIWGWSYGGFTSLKTVELDN-GDTFKYAMAVAPVTNWTLYDSVYTERYMNQPSENHEGYFEVSTIQNFKSFESLKRLFIVHGTFDDNVHIQNTFRLVDQLNLLGLTNYDMHIFPDSDHSIRYHNAQRIVFQKLYYWL 915          
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: DPP6_MOUSE (Dipeptidyl aminopeptidase-like protein 6 OS=Mus musculus GN=Dpp6 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.585e-17
Identity = 55/205 (26.83%), Postives = 95/205 (46.34%), Query Frame = -2
Query:  183 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXSAITLARFPD----VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVYKMKGK-LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 782
            Y  L+ V G P  Q V + +   V      + S G +V K D RG+  +G K    ++   G ++ +DQ+     ++K+       +           S   L    +     F C  + +P+T +  Y + ++E+Y+GL   D   YE + + H V  ++ +  L++H   DE +HF+HTA LI  L+  +  Y + I+PDE H
Sbjct:  561 YPLLLVVDGTPGSQSVTERF--EVTWETVLVSSHGAVVVKCDGRGSGFQGTKLLQEVRRRLGFLEEKDQMEAVRTMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKLAHRVSALEDQQFLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESH 763          
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: DPP6_RAT (Dipeptidyl aminopeptidase-like protein 6 OS=Rattus norvegicus GN=Dpp6 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.907e-17
Identity = 55/205 (26.83%), Postives = 95/205 (46.34%), Query Frame = -2
Query:  183 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXSAITLARFPD----VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVYKMKGK-LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 782
            Y  L+ V G P  Q V + +   V      + S G +V K D RG+  +G K    ++   G ++ +DQ+     ++K+       +           S   L    +     F C  + +P+T +  Y + ++E+Y+GL   D   YE + + H V  ++ +  L++H   DE +HF+HTA LI  L+  +  Y + I+PDE H
Sbjct:  616 YPLLLVVDGTPGSQSVSERF--EVTWETVLVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGFLEEKDQMEAVRTMLKEQYIDKTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKLAHRVSALEDQQFLIIHATADEKIHFQHTAELITQLIKGKANYSLQIYPDESH 818          
BLAST of CN181628 vs. ExPASy Swiss-Prot
Match: DPF2_CAEEL (Dipeptidyl peptidase family member 2 OS=Caenorhabditis elegans GN=dpf-2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.025e-13
Identity = 58/206 (28.16%), Postives = 98/206 (47.57%), Query Frame = -2
Query:  183 LISVYGGPCVQLVCDSW--INTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIXXXXXXXXXXXSA------ITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVYKMKG-KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 773
            L+ +YGGP  + V       + + + +QY     I   ++D RGT  RG   + ++    G  +  D L     +I+  +   G I                   I +    ++ +CA+S APVT +  YD+ YTE+Y+G P+E+  GY  ++V+ H   +   K LL HG  D+NVH++++AR   AL      +  L++ +E H
Sbjct:  603 LLDIYGGPDSKQVFQKTPTAHAIQIVSQY----DIAYARIDVRGTGGRGWDVKEAVYRKLGDAEVVDTLD----MIRAFINTFGFIDEDRIAVMGWSYGGFLTSKIAIKDQGELVKCAISIAPVTDFKYYDSAYTERYLGQPAENLQGYINTNVIPHARNVTNVKYLLAHGERDDNVHYQNSARWSEALQQNGIHFTQLVYANEAH 800          
The following BLAST results are available for this feature:
BLAST of CN181628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
DPP6_BOVIN6.205e-1928.29Dipeptidyl aminopeptidase-like protein 6 OS=Bos ta... [more]
DPF1_CAEEL1.528e-1728.36Dipeptidyl peptidase family member 1 OS=Caenorhabd... [more]
DAP2_YEAST1.996e-1728.44Dipeptidyl aminopeptidase B OS=Saccharomyces cerev... [more]
DPP6_PANTR4.447e-1727.32Dipeptidyl aminopeptidase-like protein 6 OS=Pan tr... [more]
DPP6_HUMAN4.447e-1727.32Dipeptidyl aminopeptidase-like protein 6 OS=Homo s... [more]
STE13_YEAST5.808e-1726.55Dipeptidyl aminopeptidase A OS=Saccharomyces cerev... [more]
DPP6_MOUSE7.585e-1726.83Dipeptidyl aminopeptidase-like protein 6 OS=Mus mu... [more]
DPP6_RAT9.907e-1726.83Dipeptidyl aminopeptidase-like protein 6 OS=Rattus... [more]
DPF2_CAEEL1.025e-1328.16Dipeptidyl peptidase family member 2 OS=Caenorhabd... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001D19_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181628 ID=CN181628; Name=CN181628; organism=Citrus sinensis; type=EST; length=804bp
CCTTTTTTAAGATCAATTCCTTGAAGGAAACCGAGGCCAATAATCTTATC
TAGTCTAAAAAAATAACATCATCCTAAACAAGGGAGAAAAAAAAAAAGAG
AGAGATTATTTCACAAAGTCCTTTCTATGAACTCCCAAATTCTCTCTTCC
ATATAAATTCTGTCCCTATGACGACGTGGCATGTGCCGTTCATCAGGGAA
GATCAATATTTCATAAGGCTTTCTGGCTGCCACAAGTGCGTTGATAAGCC
TTGCCGTGTGCCTAAAATGCACATTTTCGTCAATCATGCCATGCACCAGT
AACAACTTCCCTTTCATCTTGTAAACGTGGTGCATCACAGAGCTGTACTC
GTAACCAACAGGATCCTCAGAAGGCAATCCCATGTACTTCTCGGTGTAAA
ATGTGTCGTATCCATCCCAGGATGTAACAGGGGCACCGGATACAGCACAC
TGGAAGACATCTGGAAACCTAGCAAGAGTAATTGCTGAGAGATAACCACC
GTAGCTCCAGCCATACAAACCAATATGGCCAACTTTTGCCAGCCCTTGTT
TGATGAGCCATTCAGCTCCAGTCAGCTGATCCTCAGCATCAATACGTCCA
CAATTGTGTTTGATAGAGGCTTCAAACTTCAAACCACGTCGAGCAGTTCC
TCTGTTATCTAGCTTCCACACCAAAATGCCTTTGCTTCGTAGATATTGTG
CTCTCATGTCAACAGTATTTATCCAAGAATCACATACAAGCTGAACACAT
GGACCACCATAAACACTTATCAAGGTTTTGTATGGCGGAGGTCCATATCT
TGAT
back to top