CN181617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.442e-46 Identity = 93/148 (62.84%), Postives = 116/148 (78.38%), Query Frame = -3 Query: 210 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 653 NKM+I+E KR++HDALCV RNL+R++ IVYGGG+AE+A +I V ADR G+EQYA RAFADAL++IPMALAENSGL PI+ LS +K +QI + GID GTNDM+EQ V ETL+ K++QI LATQVV+MILKIDDV P + Sbjct: 390 NKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDVRVPDD 537
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 176.792 bits (447), Expect = 8.686e-44 Identity = 83/144 (57.64%), Postives = 113/144 (78.47%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 NKM+++E +R++HD+LCV RNL++++ +VYGGGAAE+ S+AV AD+ G++QYA R FA ALD IPM LAENSGL PI TLS +K++Q++E N G+DC G+NDM+E V + IGK+QQILLATQ+ +MILKID+VI Sbjct: 412 NKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVI 555
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.301e-31 Identity = 68/145 (46.90%), Postives = 97/145 (66.90%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 N ++IEE KRSI DALC RN++ N+ IVYGGG++E++CS+A++ A Y G E+ AI F AL+ IP+ LA NSG PI S ++ Q+ N + G+DC G DM++ VF+ L K +Q +ATQ+V M+LKID+V+S Sbjct: 384 NDLVIEEAKRSIRDALCAVRNILTNSRIVYGGGSSEMSCSLALERIATGYSGEEREAILGFGRALEEIPLCLARNSGHDPIGYSSDLRKLQMESKNFHLGVDCLGDGEQDMKKLGVFDALSSKIRQFQMATQLVTMVLKIDNVVS 528
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 2.539e-27 Identity = 61/145 (42.07%), Postives = 95/145 (65.52%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y IRAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 397 NKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTTGINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVVN 540
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.316e-27 Identity = 62/145 (42.76%), Postives = 93/145 (64.14%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 NK+++EE +RS+HDALCV R L++ + + GGGA EI +I + A A GV+ Y RAFA+AL+ IP LAEN+GL PI T++ ++N+ + N GI+ D+ +NV + L+ I LA++ V+ ILKIDD+I+ Sbjct: 387 NKLVLEEAERSLHDALCVVRCLVKKRAQIAGGGAPEIEMAIQLAAHAQTLEGVDAYCFRAFANALEVIPSTLAENAGLNPIATVTELRNRH-AQGEKNAGINVRKGAITDILAENVVQPLLVSTSSITLASETVRSILKIDDIIN 530
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27 Identity = 60/145 (41.38%), Postives = 95/145 (65.52%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 394 NKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27 Identity = 60/145 (41.38%), Postives = 95/145 (65.52%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 394 NKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27 Identity = 60/145 (41.38%), Postives = 95/145 (65.52%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 394 NKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27 Identity = 60/145 (41.38%), Postives = 95/145 (65.52%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 394 NKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.666e-26 Identity = 59/145 (40.69%), Postives = 96/145 (66.21%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RA++DAL+ IP LAEN+GL PI T++ ++N+ + + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 391 NKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRH-AQGDKMAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVVN 534 The following BLAST results are available for this feature:
BLAST of CN181617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181617 ID=CN181617; Name=CN181617; organism=Citrus sinensis; type=EST; length=655bpback to top |