CN181617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_TETPY (T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 48/146 (32.88%), Postives = 80/146 (54.79%), Query Frame = -3 Query: 222 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIREN--NPNCGIDCNDV-GTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 650 + I E +RS++DA+ + R ++ N IV GGGA E+ S + + + G Q I AFA AL+ IP +A+N+G I+ L+ ++ + E+ + N G+D N V G + E V+E +I ++ AT+ IL ID+ + Sbjct: 379 EQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAIELEISRLLRLHSRKTEGKVQLVINAFAKALEVIPKTIADNAGHDSIQVLNKLRQKHALESDQSKNFGVDINAVDGIGNNFENFVWEPIIVRKNAFSAATEAACTILSIDETV 524
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.219e-14 Identity = 45/143 (31.47%), Postives = 78/143 (54.55%), Query Frame = -3 Query: 222 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 650 + +EET+RS+HDA+ + R I+N+S+V GGGA E+ S + + PG +Q I A+A AL+ IP L +N+G L+ ++ + + G+D N+ D E V+E I + + A++ +I+ +D+ I Sbjct: 379 EQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRAKH-AQGGMWYGVDVNNEDIADNFEACVWEPAIVRINALTAASEAACLIVSVDETI 520
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPQ_DICDI (T-complex protein 1 subunit theta OS=Dictyostelium discoideum GN=cct8 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.491e-14 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = -3 Query: 222 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 644 ++++ +R+I D + V + + ++ + G GA EI S + A AD PG+ QY+IR +A+A + IP LAE SG + +S + + N N G+D + E +V + K I LAT +L++D +I Sbjct: 378 ILDDIERAIDDGVNVFKGMCKDGRFLAGAGAFEIEASRKLQAFADATPGLSQYSIRQYAEAFEIIPRTLAETSGHDSSKAISNIYAAHTK-GNTNYGLDIESGQPKSVLEMDVLDAFASKLFAIKLATNTANTVLRVDQII 517
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.491e-14 Identity = 44/143 (30.77%), Postives = 78/143 (54.55%), Query Frame = -3 Query: 222 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 650 + +EET+RS+HDA+ + R I+N+S+V GGGA E+ S + + PG +Q I A+A AL+ IP L +N+G L+ ++ + + G+D N+ D E V+E + + + A++ +I+ +D+ I Sbjct: 379 EQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARH-AQGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 520
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.491e-14 Identity = 44/143 (30.77%), Postives = 78/143 (54.55%), Query Frame = -3 Query: 222 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 650 + +EET+RS+HDA+ + R I+N+S+V GGGA E+ S + + PG +Q I A+A AL+ IP L +N+G L+ ++ + + G+D N+ D E V+E + + + A++ +I+ +D+ I Sbjct: 379 EQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARH-AQGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 520
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_ENCCU (T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi GN=CCT7 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.172e-14 Identity = 44/144 (30.56%), Postives = 72/144 (50.00%), Query Frame = -3 Query: 222 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDV---GTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 644 ++EE RS+HDA+CV R +R +V GGG+ E+ S + + +Y + +A A + IP+ LA N GL I T+ Q +R+ + N G C + G DM++ ++E L K+ + + I+ ID I Sbjct: 368 VLEEIGRSVHDAVCVVRTALRTRKVVTGGGSVEMELSRIIREKSMKYDDKRMFVAKAVGQAFEKIPLLLARNFGLDTISTI-----QDLRKRHAN-GDSCEGISIDGARDMQKLGIYEPLEVKKNMVKASFSAAASIIMIDSTI 505
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14 Identity = 45/140 (32.14%), Postives = 75/140 (53.57%), Query Frame = -3 Query: 222 IEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 641 I E +RS+HDA+ + ++ ++NN +V GGGA E+ S + + G +Q I AFA +L+ IP L +N+G L+ ++ Q + G+D + G + E+ V+E K IL AT+ +IL +D+ I Sbjct: 387 IAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAK-GEMWAGVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETI 525
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14 Identity = 43/147 (29.25%), Postives = 80/147 (54.42%), Query Frame = -3 Query: 210 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 650 + I+E +RS+HD++ + R ++ S+V GGGA E+ S + + G +Q I AFA AL+ IP +A+N+G + L+ ++ Q+ + G+D + G D E ++E + K I+ AT+ +IL +D+ + ++ Sbjct: 379 EQFIDEAERSLHDSIMIVRRARKHRSVVAGGGAIEMEVSKYLRDYSLSIEGKKQLLINAFAKALEVIPRQIADNAGFDSTDILNQLR-QKHAQGEKWFGVDIVNEGICDTYESAIWEPSLVKLNSIVAATEATCLILSVDETVQNNQ 524
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14 Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = -3 Query: 210 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNC---GIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 653 +K ++ ET+R++ DAL VARNL+ +V GGGA E+A S + + P A A AL+ IP LA+N G I L+A++ + GID DM +N++E L K Q A + ++L+IDD++S S+ Sbjct: 382 SKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRKQVKGP------YTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSK 526
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.223e-13 Identity = 43/143 (30.07%), Postives = 78/143 (54.55%), Query Frame = -3 Query: 222 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 650 + +EET+RS+HDA+ + R I+N+S+V GGGA E+ S + + PG +Q I A+A AL+ IP L +N+G L+ ++ + + G+D N+ D + V+E + + + A++ +I+ +D+ I Sbjct: 379 EQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARH-AQGGMWYGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETI 520 The following BLAST results are available for this feature:
BLAST of CN181617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181617 ID=CN181617; Name=CN181617; organism=Citrus sinensis; type=EST; length=655bpback to top |