CN181617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25 Identity = 56/143 (39.16%), Postives = 91/143 (63.64%), Query Frame = -3 Query: 225 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 653 NK++++E +RS+HDALCV R+L++ ++ GGGA EI S V A + G+ Y +RA+A+AL+ IP LAEN+GL PI ++ ++N+ + N GI+ ++ ++NV + L+ + LAT+ V M+LKIDD+ Sbjct: 388 NKLVLDEAERSLHDALCVIRSLVKKKFLIAGGGAPEIEVSQQVTAFSKTLTGITSYCVRAYAEALEIIPYTLAENAGLHPISIVTELRNKH-AQGEINSGINVRKGAITNILQENVVQPLLVSTSALTLATETVVMLLKIDDI 529
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.540e-24 Identity = 59/144 (40.97%), Postives = 89/144 (61.81%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 NK+++EE RSIHDALCV R L++ +++ GGGA E+ ++ + A G QY RAFADAL+ IP LAEN+GL PI T++ ++N N + G++ DM E++V + L+ I A++ V+ ILKIDD++ Sbjct: 394 NKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNH-ANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.853e-24 Identity = 55/143 (38.46%), Postives = 91/143 (63.64%), Query Frame = -3 Query: 225 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 653 N+++++ET+RSIHDALCV R L++ +++ GGGA EI S + + A++ GVEQ+ + FA AL+ IP LAEN+GL I ++ ++N+ N GI G ++ +++V + ++ I LA++ VK IL+IDD+ Sbjct: 388 NQLVLDETERSIHDALCVVRCLVKEKALIAGGGAPEIEVSRVLMSEANKLSGVEQFVYQEFAQALEVIPTTLAENAGLNSINVVTDLRNRH-ANGEKNAGISVRRSGASNTYDEHVLQPVLVSSSAITLASECVKSILRIDDI 529
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.984e-24 Identity = 63/142 (44.37%), Postives = 88/142 (61.97%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +++E +R++ DA+ V ++++ + I+ GGGAAEI SI +D A G EQ AI AFA+AL IP LAEN+GL PIETL V +E P GID + DM E+ V E + K+Q I A++ MIL+IDDVI+ Sbjct: 383 VVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH-KEKGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIA 523
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.955e-23 Identity = 62/145 (42.76%), Postives = 89/145 (61.38%), Query Frame = -3 Query: 210 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 644 +++E +R++ DA+ V ++++ + I+ GGGA+EI SI +D A G EQ AI AFA+AL IP LAEN+GL PIETL V +E GID + DM E+ V E + K+Q I A++ MIL+IDDVI+ S+ Sbjct: 383 VVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH-KEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.459e-22 Identity = 54/143 (37.76%), Postives = 88/143 (61.54%), Query Frame = -3 Query: 225 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 653 N M+++ET+RS+HDALCV R L++ ++ GGGA EI S ++ + GVE Y + FA AL+ IP LAEN+GL I+ ++ ++++ + N GI GT + E+++ + ++ I LA++ VK IL+IDD+ Sbjct: 384 NSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITELRSRH-ENGDVNEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 525
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.345e-22 Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = -3 Query: 210 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 644 +++E +R+I DA+ V + + +V GGGA E+ + + AD G EQ A+ AFADAL+ IP LAENSGL PI+ L ++ + + GID D DM E+ V E L K Q + AT+ +MIL+IDDVI+ E Sbjct: 385 VVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKH-EDGQVTAGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIAARE 528
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.220e-21 Identity = 54/143 (37.76%), Postives = 86/143 (60.14%), Query Frame = -3 Query: 225 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 653 N M+I+ET+RS+HDALCV R L++ ++ GGGA EI S + A GV+ + + FA AL+ IP LAEN+GL I+ ++ ++++ N GI GT + E+++ + ++ I LA++ VK IL+IDD+ Sbjct: 383 NNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKH-ENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 524
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.594e-21 Identity = 56/145 (38.62%), Postives = 88/145 (60.69%), Query Frame = -3 Query: 225 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENN--PNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 653 N M+++ET+RS+HDALCV R L++ +++ GGGA EI S + A GVE + + +A+AL+ IP LAEN+GL +L+ V ++R N N GI GT++ E ++ + ++ I LA++ VK IL+IDD+ Sbjct: 385 NNMVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSYRLMKEARTMEGVEAFVWQEYAEALEVIPTTLAENAGL---NSLNVVTELRLRHENGESNSGISVRRSGTSNTYEDHILQPVLVSTSAIRLASECVKSILRIDDI 526
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.594e-21 Identity = 51/143 (35.66%), Postives = 87/143 (60.84%), Query Frame = -3 Query: 225 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 653 N ++++ET+RS+HDALCV R L++ +++ GGGA EI S + + GVE + + FA+AL+ IP LAEN+GL I+ ++ ++++ N GI GT + ++++ + ++ I LA + VK IL+IDD+ Sbjct: 384 NNVVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSRTIMRESRAMQGVEAFVWQEFAEALEVIPTTLAENAGLNSIKVVTELRSRH-ESGETNAGISVRRSGTTNTYDEHILQPVLVSTSAITLAAECVKSILRIDDI 525 The following BLAST results are available for this feature:
BLAST of CN181617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181617 ID=CN181617; Name=CN181617; organism=Citrus sinensis; type=EST; length=655bpback to top |