CN181617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.082e-21 Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = -3 Query: 210 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 644 +++E +R++ DA+ V ++++ + IV GGA EI SI +D A G EQ AI AFA+AL IP LAEN+GL PIETL V +E P G+D + DM E+ V + +Q I A++ MIL+IDDVI+ S+ Sbjct: 383 VVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH-KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPQ_SCHPO (Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces pombe GN=cct8 PE=2 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 2.719e-21 Identity = 43/145 (29.66%), Postives = 90/145 (62.07%), Query Frame = -3 Query: 222 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGID--CNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 650 K +++ +R+I D + + + L+++N +++G GA+++ I + + ++ PG+ Q+AI+ + +A + +P ++EN+GL P + +S + +EN + G+D C + GT D +E +F+ L+ K+ I LAT+ V +L +D V+ Sbjct: 382 KTYLDDLERAIDDGVNIVKALVKDNRLIFGAGASDMQLCIRLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGLDPTDVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLNVDQVV 526
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.551e-21 Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +IEE R++ DA+ V I + IV GGGAAEI ++ + A+ G EQ A+RAFADAL+ +P LAEN+GL IE L ++ + NN G++ +M E V E L K Q I AT+ +M+L+IDDVI+ Sbjct: 378 VIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYAEGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIA 519
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.638e-21 Identity = 59/145 (40.69%), Postives = 86/145 (59.31%), Query Frame = -3 Query: 210 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 644 +++E +R++ DA+ V ++++ + IV GGA EI +I +D A G EQ AI AFA+AL IP LAEN+GL PIETL V +E P G+D + DM E+ V + +Q I A++ MIL+IDDVI+ S+ Sbjct: 383 VVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH-KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.057e-21 Identity = 58/145 (40.00%), Postives = 86/145 (59.31%), Query Frame = -3 Query: 210 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 644 +++E +R++ DA+ V ++++ + I+ GGA EI +I +D A G EQ AI AFA+AL IP LAEN+GL P+ETL V +E P G+D + DM E+ V L +Q I A++ MIL+IDDVI+ S+ Sbjct: 383 VVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAH-KEKGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.762e-20 Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 ++EE R+I DA+ V + + IV GGGA EI + + A+ G EQ A++AFADAL+ IP LAENSGL PI+ L ++ +E G+D + DM E+ V E L K Q I AT+ M+L+IDDVI+ Sbjct: 380 VVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIA 521
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 54/142 (38.03%), Postives = 82/142 (57.75%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +++E +RS+HDAL V + I + IV GGGA E + + A + PG Q A+ AFA A++A+P ALA N+G PIE L +++ + N G+D + DM + V E + K + AT+V +IL+IDDVI+ Sbjct: 390 LVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVIA 531
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 52/143 (36.36%), Postives = 86/143 (60.14%), Query Frame = -3 Query: 225 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 653 N + +EE +RS+HDALCV R L++ +++ GGG+ EI + + A + G E IRAF++AL+ IP+ LAEN+GL I+ ++ ++++ GI+ ++ E+NV + L+ I LA + KMI+KIDD+ Sbjct: 382 NLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRH-ANGEKTAGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +++E +RS+ DA+ V + + + +V GGGA EI ++ + A G EQ A AFA AL+ IP ALAENSGL PI+ L ++ E G+D M+E+ V E L K Q I AT+V MIL+IDDVI+ Sbjct: 383 VVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAH-EEGKTTYGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVIA 523
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 57/144 (39.58%), Postives = 83/144 (57.64%), Query Frame = -3 Query: 219 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 650 K + EE +R++ DA+ V + + + +V GGGA E+ + + AD G EQ A+ AFADAL+ +P LAEN+GL I+ L V + E +P GID D DM+E V E K+Q I A + +MIL+IDD+I+ Sbjct: 374 KHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARKLREYADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVL--VDLRAAHEESPYMGIDVFDGNIVDMKEAGVIEPQRVKKQAIQSAAEAAEMILRIDDMIA 515 The following BLAST results are available for this feature:
BLAST of CN181617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181617 ID=CN181617; Name=CN181617; organism=Citrus sinensis; type=EST; length=655bpback to top |