CN181617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPQ_HUMAN (T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1 SV=4) HSP 1 Score: 92.8189 bits (229), Expect = 1.650e-18 Identity = 51/143 (35.66%), Postives = 83/143 (58.04%), Query Frame = -3 Query: 222 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGID--CNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 644 ++++ +R++ D + + L R+ +V GGGA EI + + + + PG+EQYAI+ FA+A +AIP ALAENSG++ E +S + +E N N G+D DM E + +T +GK I LAT +L++D +I Sbjct: 384 LMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVH-QEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQII 525
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 47/145 (32.41%), Postives = 83/145 (57.24%), Query Frame = -3 Query: 210 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 644 +++E +R + DAL V+ + + ++ GGGA E+ + + AD G EQ A+ AFAD+L+ +P LAEN+GL I+TL +++ +++ + G++ D E V E K+Q + A++ ++LKIDD+IS + Sbjct: 385 VVDELERGVSDALDVSAQTLSDGRVLPGGGATEVEVASRLRDFADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAHENDDDEHIGLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDIISAGD 529
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGID-CNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 N M ++E +RSI+DAL RN++ IV GGGA E ++ + A G EQ AI FA+AL+ IPM LAE +G++PI+TL ++ + + N G+D N +DM NV E + K Q + A + ILKIDD+I+ Sbjct: 386 NDMALDEAERSINDALHSLRNVLMKPMIVAGGGAVETELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQTLMDLRAKHAK-GLINAGVDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLIA 530
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPQ_CAEEL (T-complex protein 1 subunit theta OS=Caenorhabditis elegans GN=Y55F3AR.3 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 49/140 (35.00%), Postives = 81/140 (57.86%), Query Frame = -3 Query: 222 IEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 641 I++ +R++ DA+ + L ++ ++ G GA EI + +++ + PG+EQYAI+ FA AL+ +P A+AEN+G+ ETL+ + + + N GID T D N+F+ GK+ I LAT ILK+D +I Sbjct: 418 IDDVERAVDDAVNTYKALTKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKLYAEHV-AGKKNAGIDIWKRETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQII 556
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 49/146 (33.56%), Postives = 86/146 (58.90%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNP-NCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 +K ++ E +R++HDAL VARN++ N +V GGGA E+ + + + + G++Q+ +A A AL+ IP LA+N G + ++ ++ + + GID N DMRE NV++ + KQQ + + + M+L+IDD++S Sbjct: 382 SKDVLNEIERNLHDALGVARNVMVNPKLVPGGGAIEMELACRLMEFSQKIEGMQQWPFKALAGALEVIPRTLAQNCGADVVRVMTELRAKHANDKEGLYWGIDGNTGKIRDMRESNVWDPISVKQQTLKTSIEATCMLLRIDDIVS 527
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.814e-18 Identity = 50/142 (35.21%), Postives = 83/142 (58.45%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +++ET+R++ DAL ++IR+ V GGGA EI + + A + G EQ AI A+A+A++ + M LAEN+GL PI+ L +++ E N G++ DM + V E + K I AT+ V ++L+IDD+++ Sbjct: 389 VVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIVA 530
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.814e-18 Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = -3 Query: 213 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDC-NDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 653 N M ++E +RS++DAL RN++ IV GGGA E ++ + A G EQ AI FA+AL+ IPM LAE +G++PI+ L ++ + + N GID N +DM + NV E + K Q + A + ILKIDD+++ S Sbjct: 386 NDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAK-GLVNSGIDAVNGKIADDMMKINVIEPVRVKSQVLKSAVEAATAILKIDDLVAAS 532
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.675e-18 Identity = 49/142 (34.51%), Postives = 83/142 (58.45%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +++ET+R++ DAL ++IR+ V GGGA EI + + A + G EQ AI A+A+A++ + M LAEN+GL PI+ L +++ E N G++ DM + V E + K + AT+ V ++L+IDD+++ Sbjct: 389 VVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIVA 530
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPQ_CHICK (T-complex protein 1 subunit theta OS=Gallus gallus GN=CCT8 PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 3.675e-18 Identity = 50/143 (34.97%), Postives = 83/143 (58.04%), Query Frame = -3 Query: 222 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCG--IDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 644 ++++ +R++ D + + L R+ +V GGGA EI + + + + PG++QYAI+ FA+A +AIP ALAENSG++ E +S + +E N N G I+ DM E + +T +GK I LAT +L++D +I Sbjct: 384 LMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLDQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVH-QEGNKNVGFDIEAEAAAVKDMLEAGILDTYLGKYWGIKLATNAAVTVLRVDQII 525
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.268e-18 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +I+E +R++ DA+ V ++++ + +++ GGA EI +I +D A + G E AI FADAL IP LAEN+GL +E L V ++ + GID + DM E+ + E L K+Q I A++ MIL+IDDVI+ Sbjct: 383 VIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH-KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIA 523 The following BLAST results are available for this feature:
BLAST of CN181617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181617 ID=CN181617; Name=CN181617; organism=Citrus sinensis; type=EST; length=655bpback to top |