CN181617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.051e-17 Identity = 46/145 (31.72%), Postives = 80/145 (55.17%), Query Frame = -3 Query: 210 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 644 +++E +R + DAL V + + + ++ GGGA E+ + + AD G EQ A+ A+ADAL+ +P LAEN+GL I+TL ++ + G++ D + V ET K+Q + A++ ++LKIDD+I+ + Sbjct: 384 VVDELERGVQDALDVVASTVADGRVLAGGGAIEVELASRLRNYADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAH-EDGQVRAGLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDIIAAGD 527
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.182e-16 Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVG---TNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 N M ++E +RSI+DAL RN++ I+ GGGA E+ ++ + A G EQ AI AFADAL+ IP LAE +GL+ I L ++ + + N G+D +G +D+ N+ E + K Q + AT+ ILKIDD+I+ Sbjct: 385 NDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAK-GLTNTGVDV--IGGKIVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLIA 529
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTND-MREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 N M+ +E +RS++DA RNL+ IV GGGA E + + A + PG EQ A AFADAL+ L+E +G+ PI L+ ++++ N GID D M E V ++L K+Q + AT+ ILKIDD+I+ Sbjct: 373 NNMVTDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRENAGKVPGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKH-ANGLKNAGIDIVKARIYDNMLELKVIDSLKVKEQVLKSATEAATAILKIDDMIA 517
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16 Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAEN---------SGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 N+ M++E RS+HD+LCV + + + +V GGGA EIA SI ++ A EQ A+ F +AL+ IP LA N S L+ + S + ++ NCG+D + + + V E ++ K + + AT+ IL+IDD+I Sbjct: 381 NEFMVDEVDRSLHDSLCVVKRTLESGYVVPGGGAVEIALSIKLEDFARTLGTKEQTAVAEFCEALNIIPKVLAANAAQDATELVSKLRALHAASQSSDDPAKKELKNCGLDLSLGKVRNNVKAGVLEPMVSKIKSLRFATEAAITILRIDDMI 533
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPB_SCHPO (Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces pombe GN=cct2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.016e-16 Identity = 44/141 (31.21%), Postives = 80/141 (56.74%), Query Frame = -3 Query: 222 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 644 +++E++R+IHDAL V + + + GGG AE+ + AV+ AA PG + A+ AFA AL +P LA+N+G E ++ +K + N G+D ++ DMR + + E L KQ + ++ +++L++D ++ Sbjct: 378 LLDESERAIHDALAVLSQTVAESRVTLGGGCAEMLMAKAVEEAATHEPGKKAVAVSAFAKALSQLPTILADNAGFDSSELVAQLKAAHY-DGNDTMGLDMDEGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRVDTIL 517
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16 Identity = 50/142 (35.21%), Postives = 78/142 (54.93%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +++ET+R++ DAL ++IR+ V GGGA E+ + + A + G EQ AI A+A AL+ + M L EN G PI+ L +++ E N GI+ DM + V E + K I AT+ +IL+IDD+I+ Sbjct: 390 VVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANKWYGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIA 531
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16 Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = -3 Query: 222 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 644 ++EE +RSIHDALCV + V G G +E+ S AVD A PG + AI +FA AL IP +A N+G E +S +K + + G++ D + E V E+ KQQ ++ A + +MI+++DD++ Sbjct: 381 ILEEAERSIHDALCVLAVTVAETRTVLGAGCSEMIMSKAVDELAAITPGKKAMAIESFAKALRQIPTIIANNAGYDSSELVSQLKAAH-HQGDKKAGLNMRDGCIGNAEELGVIESFKVKQQVLVSAHEAAEMIMRVDDIL 520
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 46/145 (31.72%), Postives = 82/145 (56.55%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 +K ++ E +R++ DA+ V RN++ + +V GGGA+E++ + + + GVEQ+ RA A AL+ IP L +N G I L++++ + +E G+D DM+E ++E L K Q A + ++L+IDD++S Sbjct: 379 SKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGASEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKHTQEGCQTWGVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVS 523
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 53/155 (34.19%), Postives = 84/155 (54.19%), Query Frame = -3 Query: 210 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVK-------NQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 653 N ++E +RS+HDAL V + ++ + IV G GA E A SI ++ A EQ AI FA A+ +IP LA N+G+ E ++ ++ ++ + +N G+D N+ D +E VFE L+ K + + AT+ IL+IDD+I E Sbjct: 378 NDFYVDEMERSLHDALLVVKRVLESKRIVPGAGACETAVSIYLENYALTLSSREQLAIAEFARAMLSIPKQLAVNAGVDSTELVARLRSCHNSSQSKPDQAHNKWWGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLIKLKE 532
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.867e-16 Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +++E +RSI D+L V + + + + GGGA + + + A + G +Q AI FADA++ IP ALAEN+GL PI+ L ++ + + N GI+ DM + V E + +Q I AT+ MIL+IDDVI+ Sbjct: 381 VVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAK-GNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIA 521 The following BLAST results are available for this feature:
BLAST of CN181617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181617 ID=CN181617; Name=CN181617; organism=Citrus sinensis; type=EST; length=655bpback to top |