CN181617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.662e-16 Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVK----NQQI---RENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 N M +E +RS+HDALCV + ++ + S+V GGGA E A SI ++ A EQ AI FA +L IP LA N+ + ++ ++ Q+ R+N G+D ++ D ++ VFE I K + + AT+ IL+IDD+I Sbjct: 381 NDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_HUMAN (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.662e-16 Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVK----NQQI---RENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 N M +E +RS+HDALCV + ++ + S+V GGGA E A SI ++ A EQ AI FA +L IP LA N+ + ++ ++ Q+ R+N G+D ++ D ++ VFE I K + + AT+ IL+IDD+I Sbjct: 381 NDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_ENCCU (T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi GN=TCP1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.662e-16 Identity = 49/149 (32.89%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRE-----NNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 N +++E +RS+HDA+CV + + +NS+V GGGA E A S+ ++ A E AI +A++L +IP L+ N+GL E ++ + + Q RE + GID D E + E + K + + AT+ IL+I++VI Sbjct: 383 NCQLLDEMQRSVHDAVCVLKRTLESNSVVPGGGAVECALSLMLEKFAFTVNSKEHVAIHRYAESLLSIPKILSTNAGLDSNELVANLLSSQSREMANSSGSKFLGIDVTSGKIQDNFEFGIIEPSVNKMKSLKAATEAAISILRINEVI 531
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.001e-15 Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVK----NQQI---RENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 N M +E +RS+HDALCV + ++ + S+V GGGA E A SI ++ A EQ AI FA +L IP LA N+ + ++ ++ Q+ R+N G+D + D ++ VFE I K + + AT+ IL+IDD+I Sbjct: 381 NDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLPVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.307e-15 Identity = 46/140 (32.86%), Postives = 77/140 (55.00%), Query Frame = -3 Query: 222 IEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 641 ++E +RS+HDAL V + V GGG AE+ S AVD A G + A+ AFA AL +P LA+N+G E +S +++ I G+D N+ DMR+ + E+ K+ + A++ +++L++D++I Sbjct: 377 LDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRS-SIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNII 515
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15 Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = -3 Query: 219 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTND-MREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 653 N M+ +E +RS++DA RNL+ IV GGGA E + + A + G EQ A AFADAL+ L+E +G+ PI L+ ++++ N GID D M E V ++L K+Q + AT+ ILKIDD+I+ Sbjct: 373 NNMITDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRDDARKVIGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKH-ATGLKNAGIDVTKARIYDNMLELRVIDSLKVKEQVLKSATEAATAILKIDDMIA 517
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15 Identity = 53/142 (37.32%), Postives = 81/142 (57.04%), Query Frame = -3 Query: 219 MIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 644 +I+E +R++ DA+ V ++++ + +++ GGA EI +I+VD A + G E AI FADAL IP LAEN+GL +E L V ++ + GID DM E+ + L +Q I A + MIL+IDDVI+ Sbjct: 383 VIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAISVDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEILVKVISEH-KNKGLGIGIDVFAGEPADMLERGIIAPLRVTKQAIKSARAAI-MILRIDDVIA 522
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15 Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVK----NQQI---RENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 N M +E +RSIHDALCV + ++ + S+V GGGA E A SI ++ A EQ AI FA +L IP LA N+ + ++ ++ Q+ R+N G+D + D ++ VFE + K + + AT+ IL+IDD+I Sbjct: 384 NDFMCDEMERSIHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDATDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQAGVFEPTLVKTKSLKFATEAAITILRIDDLI 534
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15 Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVK----NQQI---RENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 N M +E +RS+HDALCV + ++ + S+V GGGA E A SI ++ A EQ AI FA +L IP LA N+ + ++ ++ Q+ R+N G+D + D ++ VFE I K + + AT+ IL+IDD+I Sbjct: 381 NDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15 Identity = 45/151 (29.80%), Postives = 79/151 (52.32%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIR-------ENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 N +M++E +RS+HD+LCV R ++ + +V GGGA E + S+ ++ A EQ A+ FA AL IP LA N+ + ++ ++ + ++ G+D + D +E + E + K + + AT+ IL+IDD+I Sbjct: 384 NDVMLDEMERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLI 534 The following BLAST results are available for this feature:
BLAST of CN181617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181617 ID=CN181617; Name=CN181617; organism=Citrus sinensis; type=EST; length=655bpback to top |