CN181615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_BOVIN (Eukaryotic translation initiation factor 2 subunit 1 OS=Bos taurus GN=EIF2S1 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 2.953e-38 Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 93 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYRKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEV 608 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL ++ D +EV Sbjct: 2 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSL-----DLNEDEREV 175
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_CHICK (Eukaryotic translation initiation factor 2 subunit 1 OS=Gallus gallus GN=EIF2S1 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.466e-37 Identity = 86/166 (51.81%), Postives = 111/166 (66.87%), Query Frame = 3 Query: 93 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYRKYGH----AFEAFKIIVTDPDSVLNSL 566 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP ++L+SL Sbjct: 2 PALSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-AILDSL 166
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_METJA (Translation initiation factor 2 subunit alpha OS=Methanocaldococcus jannaschii GN=eif2a PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.685e-17 Identity = 58/170 (34.12%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 126 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFKIIVTDPDSVLNSL--TREVK----EIGPDGQEVTKV 617 +PE V+ VK++ GA+V LLEY EGMI SE KVG+ VLRVD+ KG+IDLS +RV+E+ +A + + + + ++ AE LG LEE + +G+ L ++G + AF+ +V + VL+ L + E K E+ + E+T V Sbjct: 8 FPEEGDIVIGTVKDVKPYGAFVELLEYPGKEGMIHISEVTSGWVKNIRDHVKVGQRVVAKVLRVDERKGHIDLSLKRVTEQQKRAKVQEWKRFQRASKMLERAAEKLGKSLEEAWEEVGYLLEDEFGELYNAFETMVIEGKEVLDDLEISEEWKNVLYEVAKESIELTNV 177
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_THEGJ (Translation initiation factor 2 subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eIF2A PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.513e-15 Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 126 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFKIIVTDPDSVLNSL 566 YPE V+ VKNI GA++ L EY EG + SE K G+ V V+RVD EKG+IDLS +RV+++ +A + Y +++ ++++ AE +G D E + + PL +YG + AF+ + VL L Sbjct: 8 YPEEGEFVVATVKNIHPYGAFLILDEYPGKEGFMHISEVAPTWVKNIRDYVKEGQKVVVKVIRVDPEKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKIGKDFETAWREVWVPLEEEYGEVYAAFEDAAQNGIEVLKGL 154
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_PYRKO (Translation initiation factor 2 subunit alpha OS=Pyrococcus kodakaraensis GN=eif2a PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.513e-15 Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 126 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFKIIVTDPDSVLNSL 566 YPE V+ VKNI GA+++L EY EG + SE K G+ V+RVD EKG+IDLS +RV+++ +A + Y +++ ++++ AE LG D E + + PL +YG + AF+ + VL L Sbjct: 8 YPEEGEFVVATVKNIHPYGAFLTLDEYPGKEGFMHISEVAPTWVKNIRDYLKEGQKIVAKVIRVDPEKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKLGKDFETAWREVWVPLEEEYGEVYAAFEDAAQNGMDVLKGL 154
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_SULTO (Translation initiation factor 2 subunit alpha OS=Sulfolobus tokodaii GN=eif2a PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14 Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 3 Query: 159 VKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTK 614 VK I D G+YV+L EY N++ + +SE K GR V V+RVDK KG ID+S ++V+E++ + ++ K + V I+ V++ + +E + + W L KYG A++A V + DS+L + I P +E+ K Sbjct: 19 VKQIFDYGSYVTLDEYGNLQAFLPWSEISSRWVKNIRDVIKEGRKIVVKVIRVDKRKGTIDVSLKKVTEDEKRKKMSQWKKIQKVDKILEIVSQKINKTEKEGWEQVAWKLEDKYGDAYDALVKAVKEGDSILKNAGVPEVWIKPLMEEIGK 170
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_THEON (Translation initiation factor 2 subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=eIF2A PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.073e-14 Identity = 47/150 (31.33%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 126 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTRE 575 YPE V+ VK+I GA++ L EY EG + SE K G+ V+RVD KG+IDLS +RV+++ +A + Y +++ ++++ AE LG D E + + PL +YG + AF+ + VL + E Sbjct: 8 YPEEGEFVIATVKSIHPYGAFLKLDEYPGKEGFMHISEVASTWVKNIRDYVKEGQKVVAKVIRVDPNKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKLGKDFEMAWQEVWVPLEEEYGEVYAAFEDAAQNGIEVLKGIIPE 157
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_PYRFU (Translation initiation factor 2 subunit alpha OS=Pyrococcus furiosus GN=eif2a PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13 Identity = 42/134 (31.34%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 126 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFK 527 YPE V+ VK + + GA++ L EY EG + SE + G+ V+RVD +KG+IDLS RRV+++ +A + + +++ ++++ AE LG D EE + + PL ++G + AF+ Sbjct: 8 YPEEGELVVATVKRVHNYGAFLDLDEYPGKEGFMHISEVASTWVKNIRDYLREGQKVVAKVIRVDPKKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFEEAWREVWVPLENEWGEVYAAFE 141
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_PIG (Eukaryotic translation initiation factor 2 subunit 1 (Fragment) OS=Sus scrofa GN=EIF2S1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.288e-13 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 93 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGR 290 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR Sbjct: 2 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGR 67
BLAST of CN181615 vs. ExPASy Swiss-Prot
Match: IF2A_PYRHO (Translation initiation factor 2 subunit alpha OS=Pyrococcus horikoshii GN=eif2a PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13 Identity = 46/144 (31.94%), Postives = 72/144 (50.00%), Query Frame = 3 Query: 126 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFKIIVTDPDSVL 557 YPE V+ VK I + GA++ L EY E + SE K G+ V+RVD KG+IDLS RRV+++ +A + + +++ +++R AE LG D E + + PL ++G + AF+ D VL Sbjct: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLRLAAEKLGKDFEAAWREVWVPLEEEWGEVYAAFEDAAKDGIEVL 151 The following BLAST results are available for this feature:
BLAST of CN181615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181615 ID=CN181615; Name=CN181615; organism=Citrus sinensis; type=EST; length=630bpback to top |