CN181612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX3_XENLA (Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis GN=an3 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24 Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 451 PFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 P + EQ + NTGINF+ Y+DIPVE +G N PP + +F ++ +GE + NI+ +Y +PTPVQ+HAIPI I RDLMACAQTGSGKTAA Sbjct: 180 PLAPNDRVEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAA 274
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX3Y_MOUSE (ATP-dependent RNA helicase DDX3Y OS=Mus musculus GN=Ddx3y PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.107e-23 Identity = 69/198 (34.85%), Postives = 93/198 (46.97%), Query Frame = 1 Query: 226 TRSTYVPPHLRNKPPTSS--------------EPPASSRESTEPASGPGW----GSGSRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXEREVNPFGDDVGAEQPVAEEE----------NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 ++ Y+PPHLRN+ + + SS S + P + GSGSR F + D+ +P+ E NTGINF+ Y+DIPVE +G N PP + F++I++GE + NI +Y +PTPVQ+HAIPI RDLMACAQTGSGKTAA Sbjct: 35 SKGRYIPPHLRNRETSKGVCDKDSSGWSCSKDKDAYSSFGSRDSRGKPNYFSDRGSGSRGRFDDHGRNDYDGIGGRDRTGFGKFERSGHSRWSDRSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAA 232
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_PICGU (ATP-dependent RNA helicase DED1 OS=Pichia guilliermondii GN=DED1 PE=3 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.752e-23 Identity = 69/188 (36.70%), Postives = 88/188 (46.81%), Query Frame = 1 Query: 229 RSTYVPPHLRNKPPTSSEPPASSRESTEPASGPGWGSGSRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXEREVNPFGDDVGA-----EQPVAEEE----------------NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 RS YVPPHLRN+P S P SR + G+GSG R DF N VG +P A E ++GINFD Y+DIPVE +G+ VP ++ F L + NI+ ++ KPTPVQ++++PI GRDLMACAQTGSGKT Sbjct: 36 RSQYVPPHLRNRPNGGSTP---SRRGDFGSRSNGFGSGRRGDFNSSGFQFGSGRRGNSGFGGRGGFGGGSGRYNSPKPGVGQWVDGKHEPAAPNERLEKELFGVAEDPSVQSSGINFDNYDDIPVEATGDGVPEPISAFTAPPLDPLIVENIKLSRFTKPTPVQKYSVPIVASGRDLMACAQTGSGKT 220
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX3X_MOUSE (ATP-dependent RNA helicase DDX3X OS=Mus musculus GN=Ddx3x PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 475 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPVQ+HAIPI RDLMACAQTGSGKTAA Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAA 233
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX3X_HUMAN (ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 475 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPVQ+HAIPI RDLMACAQTGSGKTAA Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAA 233
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX3L_MOUSE (Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus GN=D1Pas1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 475 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPVQ+HAIPI RDLMACAQTGSGKTAA Sbjct: 146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAA 232
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX4_RANLE (Probable ATP-dependent RNA helicase DDX4 OS=Rana lessonae GN=ddx4 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.046e-22 Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 475 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 E + + TGINFD Y+DI VE SG +VPPA+ TF E +L ++L N+ + YVK TP+Q+H+IPI + GRDLMACAQTGSGKTAA Sbjct: 253 ESDIFKHYQTGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAA 339
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX4_XENLA (Probable ATP-dependent RNA helicase DDX4 OS=Xenopus laevis GN=ddx4 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 475 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 E + + +GINFD Y++I V+ +G++VPPA+ TF E +L E L N+ R YVK TPVQ+H+IPI + GRDLMACAQTGSGKTAA Sbjct: 241 EDNIFRQYQSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAA 327
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_LODEL (ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus GN=DED1 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21 Identity = 73/203 (35.96%), Postives = 94/203 (46.31%), Query Frame = 1 Query: 229 RSTYVPPHLRNKPPTSSEPPASSRESTEP-------------------------ASGPGWG-------SGSRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXER-EVNPFGDDVGAEQPVAEE---ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 R YVPPHLRN+ +S +P ++ P SGP G GSR F +R E+ FG VAE+ +++GINFD Y+DIPVE SGE VP +N+F L E L NI+ ++ KPTPVQ++++PI GRDLMACAQTGSGKT Sbjct: 34 RRQYVPPHLRNR--SSHQPSSNGANGDIPFGGSRRSDYGGGRGGFGFGGGSNGGGSGPSGGYRNGGARGGSRGGFGGGRYQRPTPGVGRWVDGKHEPAPRNDRLELELFG--------VAEDTLFQSSGINFDNYDDIPVEASGEGVPEPINSFTAPPLDELLVENIKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 226
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX4_RAT (Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus GN=Ddx4 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21 Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 475 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPVQ+++IPI + GRDLMACAQTGSGKTAA Sbjct: 240 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAA 326 The following BLAST results are available for this feature:
BLAST of CN181612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181612 ID=CN181612; Name=CN181612; organism=Citrus sinensis; type=EST; length=736bpback to top |