CN181612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_BOTFB (ATP-dependent RNA helicase ded1 OS=Botryotinia fuckeliana (strain B05.10) GN=ded1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19 Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 436 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 ERE+ DD +Q TGINF+ Y+DIPVE SG++VP V F L + L NI Y PTPVQ+++IPI +GGRDLMACAQTGSGKT Sbjct: 147 ERELFGIADDPTKQQ-------TGINFEKYDDIPVEASGQDVPEPVLKFTNPPLDDHLIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKT 237
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_ASPFU (ATP-dependent RNA helicase ded1 OS=Aspergillus fumigatus GN=ded1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19 Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 493 EENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 +++TGINF Y+DIPVE SG +VP VN F L + L NI+ +Y PTPVQ+++IPI + GRDLMACAQTGSGKT Sbjct: 161 KQSTGINFANYDDIPVEASGHDVPEPVNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKT 239
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_CANAL (ATP-dependent RNA helicase DED1 OS=Candida albicans GN=DED1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.411e-19 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 496 ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 +++GINFD Y+DIPVE SG+ VP + +F L E L NI+ ++ KPTPVQ++++PI GRDLMACAQTGSGKT Sbjct: 160 QSSGINFDNYDDIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 237
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_ASHGO (ATP-dependent RNA helicase DED1 OS=Ashbya gossypii GN=DED1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.411e-19 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 496 ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 +++GINFD Y+DIPV+ SGE+VP + F L E L NI+ ++ KPTPVQ++++PI GRDLMACAQTGSGKT Sbjct: 120 QSSGINFDNYDDIPVDASGEDVPDPITEFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKT 197
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DDX3_DICDI (Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum GN=ddx3 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.411e-19 Identity = 48/83 (57.83%), Postives = 65/83 (78.31%), Query Frame = 1 Query: 493 EENTGINFDAYED--IPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 735 ++N GI+F+AY+D I +ETS E++ +N+FA++DLG+ L NI+ KY KPTPVQ+ A+PI + RDLMACAQTGSGKTAA Sbjct: 219 DDNIGIDFNAYDDDDISIETS-EHICAPLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAA 300
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_AJECN (ATP-dependent RNA helicase DED1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DED1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.149e-19 Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 436 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 ERE+ FG+ A+ P +++TGINF Y+ IPVE SG +VP ++ F L E L NI +Y PTPVQ+++IPI +GGRDLMACAQTGSGKT Sbjct: 164 EREL--FGE---ADDPT--KQHTGINFSNYDSIPVEASGHDVPESITAFTNPPLHEHLLSNIVLARYTVPTPVQKYSIPIVMGGRDLMACAQTGSGKT 254
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DBP1_CANGA (ATP-dependent RNA helicase DBP1 OS=Candida glabrata GN=DBP1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.149e-19 Identity = 65/182 (35.71%), Postives = 82/182 (45.05%), Query Frame = 1 Query: 238 YVPPHLRNKPPTSSEPPASSRESTEPASGPGWGS--------------GSRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXEREVNPFGDDVGAEQPV----AEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 YVPPH+R S E A+ S SG G+ S GSRP + P+ + E + + +GINFD Y+DIPVE SG+NVP A+ F L E L N+ + KPTPVQ+++IPI RDLMACAQTGSGKT Sbjct: 8 YVPPHIRRGGGNSHESAAADGLSGSRYSGNGFFSSPNRGNHKSSGGFFGSRPFNDRRTGQGSRASGSGGFGGSGGRYGWVNGKHVPYPKNPRLEMELFGNATDHVTSGINFDNYDDIPVEASGDNVPEAITEFKSPPLDELLLENVELANFSKPTPVQKYSIPIVTKNRDLMACAQTGSGKT 189
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_PHANO (ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum GN=DED1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 493 EENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 ++ TGINF+ Y+DIPVE SG+ VP V F L + L NI Y PTPVQ+++IPI +GGRDLMACAQTGSGKT Sbjct: 174 KQQTGINFEKYDDIPVEASGQGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKT 252
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_DEBHA (ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii GN=DED1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1 Query: 475 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 E+P + ++GINFD Y+DIPVE SGE VP + F L L N++ ++ KPTPVQ++++PI GRDLMACAQTGSGKT Sbjct: 125 EEPTTQ--SSGINFDNYDDIPVEASGEGVPEPITAFTAPPLDPLLVENVKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 207
BLAST of CN181612 vs. ExPASy Swiss-Prot
Match: DED1_YEAST (ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae GN=DED1 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 63/174 (36.21%), Postives = 84/174 (48.28%), Query Frame = 1 Query: 238 YVPPHLRNKPPTSSEPPASSRESTEPASGPGWGSGS------RPDFXXXXXXXXXXXXXXXXXXXXXXXXXXEREVNPFGDDVG-AEQPVAEEEN---TGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 729 YVPPHLR KP S+ +S+ + G G GS R + + P + A V E+ N +GINFD Y+DIPV+ SG++VP + F L L NI+ ++ KPTPVQ++++PI GRDLMACAQTGSGKT Sbjct: 21 YVPPHLRGKP-RSARNNSSNYNNNNGGYNGGRGGGSFFSNNRRGGYGNGGFFGGNNGGSRSNGRSGGRWIDGKHVPAPRNEKAEIAIFGVPEDPNFQSSGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKT 193 The following BLAST results are available for this feature:
BLAST of CN181612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181612 ID=CN181612; Name=CN181612; organism=Citrus sinensis; type=EST; length=736bpback to top |