CN181609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 6.590e-87 Identity = 130/140 (92.86%), Postives = 135/140 (96.43%), Query Frame = 1 Query: 151 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFSEGGLDYLGN SLIHAQSILAIWA QV+LMG+ Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGA 150 HSP 2 Score: 64.6994 bits (156), Expect = 6.590e-87 Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPL 652 GAVEGYRIAGGPLGEVTDP+YPGGSFDPL Sbjct: 149 GAVEGYRIAGGPLGEVTDPIYPGGSFDPL 177
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 8.591e-87 Identity = 133/158 (84.18%), Postives = 144/158 (91.14%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG+ Sbjct: 13 FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGA 170 HSP 2 Score: 55.0694 bits (131), Expect = 8.591e-87 Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 2 Query: 566 GAVEGYRIAG-GPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AG GPLGE D LYPGGSFDPLG Sbjct: 169 GAVEGYRVAGEGPLGEAEDLLYPGGSFDPLG 199
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 3.245e-86 Identity = 130/142 (91.55%), Postives = 135/142 (95.07%), Query Frame = 1 Query: 151 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 GRI+MRKT K +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG+ Sbjct: 26 GRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA 167 HSP 2 Score: 65.855 bits (159), Expect = 3.245e-86 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYRIAGGPLGEV DPLYPGGSFDPLG Sbjct: 166 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 195
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 4.233e-86 Identity = 131/158 (82.91%), Postives = 138/158 (87.34%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV S +E+ R+SMRKT + GSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFSEGGL YLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 13 FAGKAVKNLSSSSEVQGDARVSMRKTAATK-KVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGA 169 HSP 2 Score: 65.4698 bits (158), Expect = 4.233e-86 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AGGPLGEV DPLYPGGSFDPLG Sbjct: 168 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 197
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 4.233e-86 Identity = 132/160 (82.50%), Postives = 142/160 (88.75%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV PS + L R++MRKT +K+ VSS SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFS+GGLDYLGNPSL+HAQS+LAIWACQVVLMG+ Sbjct: 13 FAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGA 171 HSP 2 Score: 65.4698 bits (158), Expect = 4.233e-86 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYRIAGGPLGE+ DPLYPGGSFDPLG Sbjct: 170 GAVEGYRIAGGPLGEIVDPLYPGGSFDPLG 199
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 1.225e-85 Identity = 131/166 (78.92%), Postives = 142/166 (85.54%), Query Frame = 1 Query: 103 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 G+ +L P N+L G R++MRK +K ++ S SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMG+ Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGA 179 HSP 2 Score: 67.0106 bits (162), Expect = 1.225e-85 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYRIAGGPLGEVTDP+YPGGSFDPLG Sbjct: 178 GAVEGYRIAGGPLGEVTDPIYPGGSFDPLG 207
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 3.548e-85 Identity = 131/158 (82.91%), Postives = 139/158 (87.97%), Query Frame = 1 Query: 103 GKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 GK + L PS EL R +MRK T K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG+ Sbjct: 18 GKQLKLNPSSQELG-AARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGA 174 HSP 2 Score: 65.855 bits (159), Expect = 3.548e-85 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYRIAGGPLGEV DPLYPGGSFDPLG Sbjct: 173 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 202
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 7.875e-85 Identity = 132/159 (83.02%), Postives = 145/159 (91.19%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMG+ Sbjct: 13 FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGA 171 HSP 2 Score: 55.0694 bits (131), Expect = 7.875e-85 Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 2 Query: 566 GAVEGYRIAG-GPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AG GPLGE D LYPGGSFDPLG Sbjct: 170 GAVEGYRVAGNGPLGEAEDLLYPGGSFDPLG 200
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.748e-84 Identity = 132/160 (82.50%), Postives = 140/160 (87.50%), Query Frame = 1 Query: 103 GKAVNLA--PSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 GK V + PS EL G R +MRK T K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG+ Sbjct: 15 GKPVETSANPSSQELG-GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGA 173 HSP 2 Score: 65.855 bits (159), Expect = 1.748e-84 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYRIAGGPLGEV DPLYPGGSFDPLG Sbjct: 172 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 201
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 3.879e-84 Identity = 131/159 (82.39%), Postives = 144/159 (90.57%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV+LMG+ Sbjct: 13 FAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGA 171 HSP 2 Score: 55.0694 bits (131), Expect = 3.879e-84 Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 2 Query: 566 GAVEGYRIAG-GPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AG GPLGE D LYPGGSFDPLG Sbjct: 170 GAVEGYRVAGNGPLGEAEDLLYPGGSFDPLG 200 The following BLAST results are available for this feature:
BLAST of CN181609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181609 ID=CN181609; Name=CN181609; organism=Citrus sinensis; type=EST; length=655bpback to top |