CN181605

Overview
NameCN181605
Unique NameCN181605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.656e-19
Identity = 57/169 (33.73%), Postives = 96/169 (56.80%), Query Frame = 2
Query:  155 FHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 655
            F   GA+VV+ DV  +  E  A +LG D     + CD++  D+V  L+ TAV +FG LD+M NNAGI   +  ++    +   +++I V+  G + G + AA +M  +++G I+  +S   ++  +G   Y+ +K GI+G+ K  A EL   GIRVN ++P  + + M+
Sbjct:   27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDA--TMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMT 193          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19
Identity = 63/174 (36.21%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE-LGQYGIRVNCVSPYGLATGMSMK 661
            V+ F    A VV+AD+ +  GE +  K   D + ++  DI+NE    N + +AV KFG LD++ NNAGI       I +   SD  +++NVN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L          + ++ IRVNCV P  + T ++ K
Sbjct:   22 VQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSIIAKHNIRVNCVCPGIIDTPLNEK 193          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = 2
Query:  167 GAKVVIADVQDKLGE--DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 676
            GA + I       GE  ++ +K G +V ++   I+ E     ++     +FG +DI+ NNAGI       +LD  ++D + +I+VN    F  +  AA++M+PQ+ G I+   S  + + G  SPAY+ +K+ + G  K    ELGQY I+VN ++P   AT +++    +P
Sbjct:   42 GANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAGIC--KLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNP 211          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18
Identity = 65/204 (31.86%), Postives = 98/204 (48.04%), Query Frame = 2
Query:   89 LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL---INVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAPIE 688
            L GK               VEL   +GA V +AD+ D+ GE +    G    Y  CDI+ E++V  LV   ++ FG LD  +NNA I        L   +  LER    +++N  G FL  K+    M+ +  KG I+ TASA   +       Y  +K+ ++GL +  AA+ G++GIRVN + P  + T M  +   + A +E
Sbjct:    4 LSGKTIIVTGGGSGIGRATVELLVASGANVPVADINDEAGEAVVATSGGKAAYFRCDIAQEEDVKALVAQTLAAFGGLDGSFNNAAIPQAG----LPLAEVSLERFRQSMDINVTGTFLCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRTPMLQRAMDNDAGLE 203          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_PHOLL (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=hcaB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18
Identity = 62/173 (35.84%), Postives = 92/173 (53.18%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER----LINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            +E F   GAKV + ++  +    LA   G D+C IH D+ + ++    V   V  FGKLD    NAGI D    S+LD     +++    L+ VN  G  LGAK AA   +   +G ++FT S  +  +G G   YT SK+G +G+++ LA EL    IRVN V+P G+ + +
Sbjct:   23 IERFIAEGAKVGVLELSAEKATALAHCFGNDICVIHGDVVSFEDNERAVAETVRCFGKLDCFVGNAGIWDHKI-SLLDASPEQIDKGFDELMGVNLKGYILGAK-AALPALTASEGSMIFTLSNSSWFSGGGGVLYTASKHGAVGMIRQLAYELAPV-IRVNGVAPCGMPSDL 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18
Identity = 66/194 (34.02%), Postives = 96/194 (49.48%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDK-LGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            RL+GKV                   + GAKVV+     +   E + D++   G D   I  D+ + D V  L+D AV  FG LDI+ +NAGI+  SFG + D    + +R+  VNT G F  A+ A R +  ++ G I+ T+S    + G+   A Y+ SK  I   V+CLA + G   I VN V+P  + T M
Sbjct:    8 RLDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNGSDAISIQADVGDPDAVTKLMDQAVEHFGYLDIVSSNAGIV--SFGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHL--REGGRIILTSSNTASVKGVPRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDM 197          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_SHISS (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Shigella sonnei (strain Ss046) GN=hcaB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAARYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: YXJF_BACSU (Uncharacterized oxidoreductase yxjF OS=Bacillus subtilis GN=yxjF PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 2
Query:  155 FHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 631
            F   GA V+++D++ +  E  A KL   G D   I  D++ E +V + V+    ++G+LDI+ NNAGI  +    I + P    E+LI V     F+  KH   +M  QQ G I+  AS    +   G  AY  +K+G++GL K  A E   +GI VN + P
Sbjct:   23 FAREGASVIVSDLRPEACEKAASKLAEEGFDAAAIPYDVTKEAQVADTVNVIQKQYGRLDILVNNAGI--QHVAPIEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKKQQFGRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALEGAPHGITVNALCP 182          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_SHIFL (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Shigella flexneri GN=hcaB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTTSKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_SHIF8 (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=hcaB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTTSKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
The following BLAST results are available for this feature:
BLAST of CN181605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
Y1350_MYCTU1.656e-1933.73Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
BACC_BACAM6.291e-1936.21Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
YGCW_ECOLI1.830e-1831.40Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
LINC_PSEPA2.391e-1831.862,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
HCAB_PHOLL5.326e-1835.843-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
STCU_EMENI6.955e-1834.02Versicolorin reductase OS=Emericella nidulans GN=s... [more]
HCAB_SHISS9.084e-1834.103-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
YXJF_BACSU2.024e-1734.57Uncharacterized oxidoreductase yxjF OS=Bacillus su... [more]
HCAB_SHIFL2.024e-1734.103-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_SHIF82.024e-1734.103-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181605 ID=CN181605; Name=CN181605; organism=Citrus sinensis; type=EST; length=693bp
GGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTTGAAGAAA
AGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGAAGGCAAA
GTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGGCGGTTGA
ACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTCCAGGATA
AGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTGCTACATC
CATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTGATACCGC
CGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCAGGAATTC
TTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGATCTAGAA
CGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCAAGCATGC
TGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTTACAGCTA
GTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATACAATATCC
AAATATGGGATTTTAGGACTAGTAAAGTGCTTGGCAGCAGAGCTTGGACA
GTATGGAATAAGAGTAAATTGCGTCTCGCCTTATGGTTTGGCGACAGGAA
TGTCGATGAAAGGTGGAGTCGATCCGGCTCCTATAGAATCATC
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