CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.255e-13
Identity = 49/169 (28.99%), Postives = 86/169 (50.89%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G +DI+ +NA + +  FGS++D  +   ++ +++N     L  K     M  +  G ++  +S        G   Y +SK  +LGL K LA EL    IRVNC++P  + T  S    +D    E SM +   ++ +  + +  A    +L S+++SY++G+ +VV GG
Sbjct:   90 GGIDILVSNAAV-NPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEK-EESMKETLRIR-RLGEPEDCAGIVSFLCSEDASYITGETVVVGGG 255          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHB8_PIG (Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN=HSD17B8 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.255e-13
Identity = 54/168 (32.14%), Postives = 90/168 (53.57%), Query Frame = -3
Query:  194 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIES--SMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 688
            ++ + AGI    F  +L   + D +++I VN  G FL  + AA+ +V     G I+  +S   ++  +G   Y  SK G++GL + +A ELG+Y IR N V P  + T M+ K  V   +++    M  MG+L G       +A+   +LAS++S Y++G ++ V GG
Sbjct:   97 VVVSCAGITRDEF--LLRMSEDDWDKVIAVNLKGIFLVTQAAAQALVSSGCPGSIINISSIIGKVGNMGQTNYAASKAGVIGLTQAVARELGRYRIRCNSVLPGFIKTPMAQK--VPQKVLDKVVGMIPMGHLGG----PPDVADVVAFLASEDSGYITGASVEVTGG 256          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DCXR_CAEEL (Probable L-xylulose reductase OS=Caenorhabditis elegans GN=dhs-21 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.255e-13
Identity = 58/168 (34.52%), Postives = 82/168 (48.81%), Query Frame = -3
Query:  188 MYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 685
            + NNAGI  + + G I    +  ++R   VN  G  L A+  AR  V +Q KG I+  +S            Y  SK  +  + +CLA ELG   IRVN V+P  + T M      DP   +  + +M   +  F + D + NA L+L SD +S  +G  L VDGGFS
Sbjct:   87 LVNNAGIATNHAIGQIT---QQSIDRTFAVNVRGPILIAQLVARNFVDRQIKGSIVNISSQAAIRPLDNHTVYCASKAALDMVTRCLANELGSQNIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRMPIKR--FAEVDEVVNAVLFLLSDNASMTTGSTLPVDGGFS 249          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.864e-13
Identity = 50/172 (29.07%), Postives = 92/172 (53.49%), Query Frame = -3
Query:  182 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 697
            KLDI+  NAGI   +    +     D +++I++N    F+  + A + M+  + G I+  +S        G   Y  SK G++G+ K L+ E+   GI VN V+P  + + M+ K  ++    E+ + ++    G +   + +A+A  +LASD++SY++GQ + V+GG  +V
Sbjct:   76 KLDILVCNAGITSDTLA--IRMKDEDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMTDK--LNEKQREAIVQKIP--LGTYGMPEDVAHAVAFLASDQASYITGQTIHVNGGMLMV 241          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BUTA_STAEQ (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.081e-13
Identity = 55/183 (30.05%), Postives = 95/183 (51.91%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGS----PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL---------KGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G+LD+M NNAG+   +   IL+  + +L +L N+N  G   G + AA   + Q+ KG I+   +AC+ IAG  S      Y+ +K+ +    +  A EL   GI VN   P    T M  +   +   ++ S+ ++G+           G++ +   +AN   +LAS++S Y++GQ+++ DGG
Sbjct:   78 GQLDVMVNNAGV--DAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKII---NACS-IAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSL-EIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITGQSILTDGG 253          

HSP 2 Score: 20.7866 bits (42), Expect = 8.081e-13
Identity = 9/21 (42.86%), Postives = 14/21 (66.67%), Query Frame = -2
Query:  696 DISNEDEVINLVDTAVSKFGK 758
            D+S + E   LV  AV++FG+
Sbjct:   59 DVSKKKEQEELVQFAVTEFGQ 79          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13
Identity = 57/181 (31.49%), Postives = 91/181 (50.28%), Query Frame = -3
Query:  194 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---------PALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 706
            + G LDI+ +NAGI+  SFG + D    + +R+  VNT G F  A+ A R +  ++ G I+ T+S    + G+   A Y+ SK  I   V+CLA + G   I VN V+P  + T M +    +            ++   + +  L    L  D +A    +LASD + ++SG+ + VDGG
Sbjct:   86 HFGYLDIVSSNAGIV--SFGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHL--REGGRIILTSSNTASVKGVPRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDMFLSVSREYIPNGETFTDEQVDECAAWLSPLNRVGLPVD-VARVVSFLASDAAEWISGKIIGVDGG 261          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCAB_SHIFL (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Shigella flexneri GN=hcaB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  362 GKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 700
            GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   79 GKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTTSKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCAB_SHIF8 (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=hcaB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  362 GKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 700
            GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   79 GKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTTSKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCAB_SHIBS (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=hcaB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  362 GKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 700
            GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   79 GKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCAB_ECOSM (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  362 GKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 700
            GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   79 GKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
DHRS4_PONAB5.255e-1328.99Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]
DHB8_PIG5.255e-1332.14Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN... [more]
DCXR_CAEEL5.255e-1334.52Probable L-xylulose reductase OS=Caenorhabditis el... [more]
FABG_RICCN6.864e-1329.073-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
BUTA_STAEQ8.081e-1330.05Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
STCU_EMENI8.964e-1331.49Versicolorin reductase OS=Emericella nidulans GN=s... [more]
HCAB_SHIFL8.964e-1341.033-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_SHIF88.964e-1341.033-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_SHIBS8.964e-1341.033-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECOSM8.964e-1341.033-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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