CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9372 contig Csv1_Contig9372:209..1026. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HDHA_ECOLI (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli (strain K12) GN=hdhA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.432e-17
Identity = 59/174 (33.91%), Postives = 88/174 (50.57%), Query Frame = -3
Query:  194 LGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 703
            LGK+DI+ NNAG          D P +D  R   +N    F    H ++++ P+ +    G IL   S   E   +   +Y  SK     LV+ +A +LG+  IRVN ++P  + T  ++K  + P  IE  M Q   ++ +  +   IANAAL+L S  +S+VSGQ L V GG
Sbjct:   86 LGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFF----HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD-ALKSVITPE-IEQKMLQHTPIR-RLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249          

HSP 2 Score: 31.187 bits (69), Expect = 8.432e-17
Identity = 15/36 (41.67%), Postives = 20/36 (55.56%), Query Frame = -2
Query:  696 DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 803
            D   +LG       CDI++E E+  L D A+SK GK
Sbjct:   53 DEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HDHA_ECO57 (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli O157:H7 GN=hdhA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.432e-17
Identity = 59/174 (33.91%), Postives = 88/174 (50.57%), Query Frame = -3
Query:  194 LGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 703
            LGK+DI+ NNAG          D P +D  R   +N    F    H ++++ P+ +    G IL   S   E   +   +Y  SK     LV+ +A +LG+  IRVN ++P  + T  ++K  + P  IE  M Q   ++ +  +   IANAAL+L S  +S+VSGQ L V GG
Sbjct:   86 LGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFF----HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD-ALKSVITPE-IEQKMLQHTPIR-RLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249          

HSP 2 Score: 31.187 bits (69), Expect = 8.432e-17
Identity = 15/36 (41.67%), Postives = 20/36 (55.56%), Query Frame = -2
Query:  696 DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 803
            D   +LG       CDI++E E+  L D A+SK GK
Sbjct:   53 DEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.096e-16
Identity = 64/186 (34.41%), Postives = 94/186 (50.54%), Query Frame = -3
Query:  155 GKLDIMYNNAGILDRSFGSILDTPKSD-LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTIMRAYG 700
            G +D + NNAGI   S G  L+T   +   +++++N  G F+G K     M     G I+  +SA   +    + +Y  SK+G+ GL K  A ELG   IRVN V P    T M+ + G+   +     + M ++GN  G+      IA A + L SD SSYV+G  L VDGG++   PT+    G
Sbjct:   79 GSVDGLVNNAGI---STGMFLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGE------IAGAVVKLLSDTSSYVTGAELAVDGGWT-TGPTVKYVMG 254          

HSP 2 Score: 23.8682 bits (50), Expect = 1.096e-16
Identity = 13/40 (32.50%), Postives = 21/40 (52.50%), Query Frame = -2
Query:  699 DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 818
            D+ G   A +LG    Y H D++ E++   +V  A  +FG
Sbjct:   40 DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG 79          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 60/174 (34.48%), Postives = 93/174 (53.45%), Query Frame = -3
Query:  185 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 706
            NLG +D + N+AGI   +   +L T   D+  L+++N +G     K A + M+ QQ G I+   S       +G   Y  SK G++G  K LA E+ +  IRVN V+P  + T M+        L E S+++M  L G+F + + +A + L+L   ES Y++G  LVVDGG  +
Sbjct:   72 NLGNIDYLVNSAGISRDAL--LLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSD------LKEDSLNKMIPL-GRFGEPEEVAQSVLFLL--ESPYITGHVLVVDGGLQL 234          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.424e-16
Identity = 59/175 (33.71%), Postives = 89/175 (50.86%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            GKLD+M NNAG+ +    S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES +       G   + + IA  A +LAS E+SYV+G  L  DGG +
Sbjct:   84 GKLDVMINNAGMENPV--SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251          

HSP 2 Score: 30.4166 bits (67), Expect = 1.424e-16
Identity = 12/32 (37.50%), Postives = 22/32 (68.75%), Query Frame = -2
Query:  696 KLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 791
            K+G +   +  D++ E +VINLV +++ +FGK
Sbjct:   54 KVGGEAIAVKGDVTVESDVINLVQSSIKEFGK 85          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: KDUD_BACSU (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Bacillus subtilis GN=kduD PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16
Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = -3
Query:  191 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 697
            ++DI+ NNAGI+ R      D P+ + + ++NVN    F+  + A R M+ +  G I+  AS  +   G+  PAYT SK+ + GL K  A E    GI+VN ++P  ++T  +     D    E  + ++    G++ + D I   A++LAS  S YV+G  L VDGG+
Sbjct:   87 QIDILVNNAGIIHREKAE--DFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIP--AGRWGQADDIGGTAVFLASRASDYVNGHILAVDGGW 251          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BDH2_BOVIN (3-hydroxybutyrate dehydrogenase type 2 OS=Bos taurus GN=BDH2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16
Identity = 56/180 (31.11%), Postives = 100/180 (55.56%), Query Frame = -3
Query:  185 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG-----MSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 706
            ++ +LD+++N AG +    G+ILD  ++D +  +N+N    +L  K     M+ Q+ G I+  +S  + I G+ +   Y+ +K  ++GL K +AA+  Q GIR NCV P  + T      +  +   + AL +    Q     G+F   + +A   +YLASDES+Y++G  +++DGG+S+
Sbjct:   71 DIERLDVLFNVAGFVHH--GTILDCEETDWDFSMNLNVRSMYLMIKAFLPKMMAQKSGNIINMSSVASSIKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARPNPEEALSDFLKRQK---TGRFATAEEVALLCVYLASDESAYITGNPVIIDGGWSL 245          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16
Identity = 57/173 (32.95%), Postives = 95/173 (54.91%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM--SMKGGVDPALIES--SMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G +DI++NNAG+ D+  G + + P    +R+I V+  G FL +K+   +M+ +  G I+ T+S     A L    Y  +K GI  L K +A +  + GIRVN +SP  + T +   + G  +  + E     ++     G+  +   +A  AL+LASD+SSYV+G+++  DGG
Sbjct:   82 GTIDILFNNAGV-DQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLML-ENGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQFREANKWITPLGRLGQPKEMATVALFLASDDSSYVTGEDITADGG 252          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCDR_XANP2 (2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16
Identity = 55/174 (31.61%), Postives = 93/174 (53.45%), Query Frame = -3
Query:  182 GKLDIMYNNAGILDRSFGSILDT-PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 700
            G +D++ NNAGI   S   +L T P    ++++ VN  G FLG +     M+ Q  G I+  AS  + +A  G  AYT SK  +L L K +A +    GIR N V P  + T M+      P L +  ++++   + +      +A+A ++LA ++++YV+G  LV+DG ++ +
Sbjct:   79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP--QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYTAI 250          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.411e-16
Identity = 59/180 (32.78%), Postives = 90/180 (50.00%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLK---------TDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G +D++ NNAGI   S   ++   + +   +I+ N    +       R M+  + G I+  +S        G   Y  +K GI+G  K L+ E+G   IRVNC++P  + T M+ KG  D            NLK ++LK          + IA AAL+LAS++SSY++GQ L VDGG +
Sbjct:   84 GTIDVVVNNAGITRDSL--LMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMT-KGLSD------------NLKNEWLKGVPLGRVGTPEEIAMAALFLASNQSSYITGQVLSVDGGMA 248          

HSP 2 Score: 26.5646 bits (57), Expect = 2.411e-16
Identity = 12/36 (33.33%), Postives = 20/36 (55.56%), Query Frame = -2
Query:  699 EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 806
            +DL+DK G  V +   D+S  D V   V   ++++G
Sbjct:   49 QDLSDKTGSKVSFALVDVSKNDMVSAQVQKFLAEYG 84          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HDHA_ECOLI8.432e-1733.917-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
HDHA_ECO578.432e-1733.917-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
HSD_STREX1.096e-1634.413-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
CBR4_XENLA1.336e-1634.48Carbonyl reductase family member 4 OS=Xenopus laev... [more]
DHG1_BACME1.424e-1633.71Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
KDUD_BACSU1.745e-1633.732-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=B... [more]
BDH2_BOVIN1.745e-1631.113-hydroxybutyrate dehydrogenase type 2 OS=Bos taur... [more]
YXBG_BACSU2.280e-1632.95Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
HCDR_XANP22.280e-1631.612-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
FABG_CHLMU2.411e-1632.783-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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