CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9372 contig Csv1_Contig9372:209..1026. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 54/172 (31.40%), Postives = 82/172 (47.67%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 700
            G L  + N AGI+    G   +       +++ VN    FLG K A   +V    G I+  +S        G+ +Y  +K  +  + K  A E    G+RVN + P G+ T ++     D    ++S   MG L         IAN AL+LASDE+ Y++G +L +DGG+SV
Sbjct:   83 GGLTTLSNTAGIIHP--GGFEEESIEGWNKMVAVNQTAIFLGIKAAIPELVKSGNGSIINISSLIGMFPTAGNASYCATKAAVRIMSKAAALEFVDRGVRVNTIVPGGMNTPITANVPPDVLKQQTSQIPMGKLGDPI----DIANGALFLASDEAKYITGVDLPIDGGWSV 248          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCDS_XANP2 (2-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecE PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = -3
Query:  182 LGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP---YGLATGMSMKG-GVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 703
            LG L  + NNAGI    FGS+  T      R++ VN  G FL +K A   M+ + +G I+   S    +      AY  +K  ++ L + +AA+    GIRVN V P    G   G  + G   DP L    +++     G+F   + IA AA++L S ++++V+G  L VDGG + +
Sbjct:   76 LGPLTGLVNNAGIA--GFGSVHATEVETWSRIMAVNVTGTFLASKAALFGMLERGRGAIVNFGSVAGLVGIPTMAAYCAAKGAVVNLTRQMAADYSGRGIRVNVVCPGTVAGTDMGRQLLGTDCDPELEARRLAKYP--MGRFGTPEDIAEAAVFLLSTKAAFVTGSVLAVDGGMTAI 249          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHRS4_HUMAN (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G +DI+ +NA + +  FGSI+D  +   ++ +++N     L  K     M  +  G ++  +S        G   Y +SK  +LGL K LA EL    IRVNC++P  + T  S    +D    E SM +   ++ +  + +  A    +L S+++SY++G+ +VV GG
Sbjct:   90 GGIDILVSNAAV-NPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEK-EESMKETLRIR-RLGEPEDCAGIVSFLCSEDASYITGETVVVGGG 255          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHBA_BACSU (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Bacillus subtilis GN=dhbA PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = -3
Query:  194 LGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD----PALIESSMS--QMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 703
            +G +DI+ N AG+L    G I      + E   +VN+ G F  ++  ++ M+ ++ G I+   S    +      AY  SK   +   KCL  EL +Y IR N VSP    T M      D      +I+ S+   + G    +  K   IA+A L+L S ++ +++  NL VDGG
Sbjct:   83 MGPIDILVNVAGVLRP--GLIHSLSDEEWEATFSVNSTGVFNASRSVSKYMMDRRSGSIVTVGSNAAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSPGSTETDMQWSLWADENGAEQVIKGSLETFKTGIPLKKLAKPSDIADAVLFLVSGQAGHITMHNLCVDGG 256          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 54/174 (31.03%), Postives = 91/174 (52.30%), Query Frame = -3
Query:  185 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 706
            NLG+++ + N AGI   +   ++ T   D+   ++ N +G  L  + A + M+ QQ+G I+   S        G   Y+ SK G++G  + LA E+ +  IRVN V+P  + T M+    ++  L++ ++       G+F     +A AA++L   ES YV+G  LVVDGG  +
Sbjct:   73 NLGRVNFLVNAAGINRDNL--LVRTNTEDMLSQLHTNLLGSMLTCRAALKTMIKQQRGSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVNVVAPGFIHTDMTK--DLNEELLKKNIP-----LGRFGDALDVAQAAVFLL--ESPYVTGHVLVVDGGLQL 235          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCAB_SHISS (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Shigella sonnei (strain Ss046) GN=hcaB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.024e-13
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  362 GKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 700
            GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   79 GKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAARYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.024e-13
Identity = 51/167 (30.54%), Postives = 86/167 (51.50%), Query Frame = -3
Query:  194 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 694
            +DI+ NNAGI   +   I+   + + + +IN+N  G F   K   R M+ Q+ G I+  +S        G   Y  +K G++GL K  A EL    I VN ++P  ++T M+ K   D   ++  M +   L  +F +   +++   +LAS+ + Y++GQ L +DGG
Sbjct:   83 IDILVNNAGITRDNL--IMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKD---VQDEMLKQIPL-ARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGG 243          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.024e-13
Identity = 58/195 (29.74%), Postives = 98/195 (50.26%), Query Frame = -3
Query:  194 TSIVISQMKMKSSISLIPPFLNL-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 769
            T  V    K +    L+   LNL G +DI+ +NA + +  FG ++D  +   ++++++N     L  K     M  +  G ++  AS  A    +GLG   Y +SK  ++GL K LA EL    IRVNC++P  + T  S     D A  E+ + ++   +    K +  A    +L S+++SY++G+ +VV GG
Sbjct:   66 TGTVCHVGKAEDRERLVATALNLHGGIDILVSNAAV-NPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGP--YNVSKTALVGLTKNLALELAAQNIRVNCLAPGLIKTSFSKALWEDKAQEENIIQKLRIRR--LGKPEECAGIVSFLCSEDASYITGETVVVAGG 255          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.790e-13
Identity = 55/183 (30.05%), Postives = 95/183 (51.91%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGS----PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL---------KGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G+LD+M NNAG+   +   IL+  + +L +L N+N  G   G + AA   + Q+ KG I+   +AC+ IAG  S      Y+ +K+ +    +  A EL   GI VN   P    T M  +   +   ++ S+ ++G+           G++ +   +AN   +LAS++S Y++GQ+++ DGG
Sbjct:   78 GQLDVMVNNAGV--DAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKII---NACS-IAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSL-EIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITGQSILTDGG 253          

HSP 2 Score: 21.557 bits (44), Expect = 4.790e-13
Identity = 13/37 (35.14%), Postives = 21/37 (56.76%), Query Frame = -2
Query:  696 EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 806
            ++  +K  Q V Y   D+S + E   LV  AV++FG+
Sbjct:   44 KEFKEKGYQAVAY-KSDVSKKKEQEELVQFAVTEFGQ 79          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.255e-13
Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = -3
Query:  191 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 700
            GK+DI+ NNAGI+ R     ++  + + + ++N+N    F  ++  AR  + Q   G I+  AS  +   G+  P+YT SK  ++G+ + +A E  ++ I VN ++P  +AT  +     D    +  + ++    G++     +   A++LAS  S YV+G  + VDGG+
Sbjct:   84 GKVDILVNNAGIIRRE--DAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGHGGKIINIASMLSFQGGIPVPSYTASKKRVMGITRIVANEWAKHNINVNAIAPGYMATNNTQHVRADQDRSKEILDRIP--AGRWGLPQDLQGPAVFLASSASDYVNGYTIAVDGGW 250          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
LINX_PSEPA3.081e-1331.402,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
HCDS_XANP23.081e-1332.582-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
DHRS4_HUMAN3.081e-1329.59Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
DHBA_BACSU3.081e-1330.112,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]
CBR4_BOVIN3.081e-1331.03Carbonyl reductase family member 4 OS=Bos taurus G... [more]
HCAB_SHISS4.024e-1341.033-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
FABG_BACSU4.024e-1330.543-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
DHRS4_RABIT4.024e-1329.74Dehydrogenase/reductase SDR family member 4 OS=Ory... [more]
BUTA_STAES4.790e-1330.05Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
KDUD_DICD35.255e-1328.652-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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