CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1B_PONAB (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Pongo abelii GN=PPP1CB PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = -1
Query:  381 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 767
            HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  172 HGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1B_PIG (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Sus scrofa GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = -1
Query:  381 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 767
            HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  172 HGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1B_MOUSE (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = -1
Query:  381 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 767
            HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  172 HGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1B_HUMAN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Homo sapiens GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = -1
Query:  381 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 767
            HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  172 HGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1B_CHICK (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Gallus gallus GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = -1
Query:  381 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 767
            HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  172 HGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1B_BOVIN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Bos taurus GN=PPP1CB PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = -1
Query:  381 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 767
            HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  172 HGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP18_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 8 OS=Arabidopsis thaliana GN=TOPP8 PE=2 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27
Identity = 60/129 (46.51%), Postives = 79/129 (61.24%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP LD L+ IR + R  E+P  G +CDLLWSDPD +  GW  S RG   TFG D  ++F   N L LI R HQ+V +GY +   + +VT+FSAPNY     N  A+L + E++  +F    PAP
Sbjct:  174 MHGGLSPDLDNLNQIREIQRPIEIPDSGLLCDLLWSDPDQKIEGWADSDRGISCTFGADKVAEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEIMKPAP 302          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1_NEUCR (Serine/threonine-protein phosphatase PP1 OS=Neurospora crassa GN=ppp-1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSP L++++ IR + R  ++P  G +CDLLWSDPD D  GW  + RG  +TFG D+ S+F   + + LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E++  +F    PA ++
Sbjct:  172 MHGGLSPDLNSMEQIRRVMRPTDIPDCGLLCDLLWSDPDKDITGWSENDRGVSFTFGPDVVSRFLQKHDMDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEKK 302          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1_EMENI (Serine/threonine-protein phosphatase PP1 OS=Emericella nidulans GN=bimG PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSP L++++ IR + R  ++P  G +CDLLWSDPD D  GW  + RG  +TFG D+ S+F   + + LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E++  +F    PA ++
Sbjct:  171 MHGGLSPDLNSMEQIRRVMRPTDIPDCGLLCDLLWSDPDKDITGWSENDRGVSFTFGPDVVSRFLQKHDMDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEKK 301          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP17_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 7 OS=Arabidopsis thaliana GN=TOPP7 PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = -1
Query:  408 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNF 770
            +HGGLSP L +L  IR + R  ++P  G +CDLLWSDPD D  GWG + RG  YTFG DI S F     L LI RAHQ+V +G+ +  +K +VT+FSAPNYC    N  A++ + E++  +F
Sbjct:  168 MHGGLSPELLSLRQIRDIRRPTDIPDRGLLCDLLWSDPDKDVRGWGPNDRGVSYTFGSDIVSGFLKRLDLDLICRAHQVVEDGFEFFANKQLVTIFSAPNYCGEFDNAGAMMSVSEDLTCSF 289          
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP1B_PONAB9.907e-2743.85Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_PIG9.907e-2743.85Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_MOUSE9.907e-2743.85Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_HUMAN9.907e-2743.85Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_CHICK9.907e-2743.85Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_BOVIN9.907e-2743.85Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP18_ARATH9.907e-2746.51Serine/threonine-protein phosphatase PP1 isozyme 8... [more]
PP1_NEUCR1.294e-2642.75Serine/threonine-protein phosphatase PP1 OS=Neuros... [more]
PP1_EMENI1.294e-2642.75Serine/threonine-protein phosphatase PP1 OS=Emeric... [more]
PP17_ARATH1.294e-2648.36Serine/threonine-protein phosphatase PP1 isozyme 7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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