CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.896e-23
Identity = 59/131 (45.04%), Postives = 78/131 (59.54%), Query Frame = -1
Query:  387 LHGGLSPSLD--TLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEI-GENMEQNFLQFDPAP 770
            +HGGL  S+D   L +IRA+DR  E P EG MC+LLWSDP    G G S RG G +FG D+  +F   N L L+ R+H++  EGY    D  ++TVFSAPNYC + GN  A +     +M+ N + F   P
Sbjct:  391 VHGGLF-SVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLQDNNLDLLVRSHEVKDEGYEVEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTFSAVP 520          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: YT91_CAEEL (Putative serine/threonine-protein phosphatase C06A1.3 OS=Caenorhabditis elegans GN=C06A1.3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.307e-22
Identity = 55/129 (42.64%), Postives = 76/129 (58.91%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP L  LD IR + R  E    G + DLLWSDP ++  GW  S RG  Y FG+ +  Q   +  + LI RAHQ+V +GY     + ++TVFS PNYC +  N AA++ +  N++ +F Q  P P
Sbjct:  201 MHGGLSPELINLDTIRNIPRPCEPLDRGLLIDLLWSDPTNKGEGWFHSIRGISYMFGKGVVEQACKSLEIDLIIRAHQVVQDGYEMMTGRRLITVFSVPNYCAQFTNAAAVVCLNANLQISFQQMIPPP 329          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPT1_SCHPO (Serine/threonine-protein phosphatase T OS=Schizosaccharomyces pombe GN=ppt1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.307e-22
Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = -1
Query:  387 LHGGL-SPSLDTLDNIRALDRI--QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGL S    TLD +R +DR   ++    G M ++LW+DP    G G S RG G  FG D++ +F   NGL  + R+H++  +GY    D   +TVFSAPNYC   GN+ A++++ E+ME +F QF+  P
Sbjct:  326 VHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDPQPAPGRGPSKRGVGLQFGPDVSKRFCEANGLKAVIRSHEVRDQGYEVEHDGYCITVFSAPNYCDSTGNLGAVIKVKEDMELDFHQFEAVP 456          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPZ2_YEAST (Serine/threonine-protein phosphatase PP-Z2 OS=Saccharomyces cerevisiae GN=PPZ2 PE=1 SV=4)

HSP 1 Score: 103.99 bits (258), Expect = 9.596e-22
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = -1
Query:  393 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDP 770
            +HGGLSP L+++D IR + R  +VP  G + DLLWSDP D    W  + RG  + + +   ++F +  G  L+ RAH +V +GY +  D+++VTVFSAPNYC    N  A++ + E +  +F   DP
Sbjct:  562 VHGGLSPVLNSMDEIRHVSRPTDVPDFGLINDLLWSDPTDSSNEWEDNERGVSFCYNKVAINKFLNKFGFDLVCRAHMVVEDGYEFFNDRSLVTVFSAPNYCGEFDNWGAVMTVSEGLLCSFELLDP 688          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPZ1_YEAST (Serine/threonine-protein phosphatase PP-Z1 OS=Saccharomyces cerevisiae GN=PPZ1 PE=1 SV=4)

HSP 1 Score: 103.99 bits (258), Expect = 9.596e-22
Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = -1
Query:  393 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDP 770
            +HGGLSP L+++D IR + R  +VP  G + DLLWSDP D    W  + RG  Y + +   ++F +  G  L+ RAH +V +GY +  D+++VTVFSAPNYC    N  A++ + E +  +F   DP
Sbjct:  527 VHGGLSPVLNSMDEIRHVVRPTDVPDFGLINDLLWSDPTDSPNEWEDNERGVSYCYNKVAINKFLNKFGFDLVCRAHMVVEDGYEFFNDRSLVTVFSAPNYCGEFDNWGAVMSVSEGLLCSFELLDP 653          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPY_DROME (Serine/threonine-protein phosphatase PP-Y OS=Drosophila melanogaster GN=PpY-55A PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.138e-21
Identity = 50/122 (40.98%), Postives = 73/122 (59.84%), Query Frame = -1
Query:  405 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFL 767
            HGGLSPSL  L  I  + R  ++P EG MCDLLW+D +    GWG + RG  +TF + I   F     L L+ RAH++V +GY +  ++ +VTVFSAPNYC    N   ++ +  ++  +F+
Sbjct:  169 HGGLSPSLRNLQQINHIQRPTDIPDEGIMCDLLWADLNHTTKGWGHNDRGVSFTFDKVIVRDFLKAFDLQLMVRAHEVVEDGYEFFANRQLVTVFSAPNYCGMMNNAGGVMSVSTDLICSFV 290          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPZ_SCHPO (Serine/threonine-protein phosphatase PP-Z OS=Schizosaccharomyces pombe GN=pzh1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.792e-21
Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = -1
Query:  393 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDP-DDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDP 770
            +HGGLSPSL  +D+IR + R  +VP  G + DLLWSDP D    W  + RG  + F +++  QF   +   LI RAH +V +GY +  D+ + TVFSAPNYC    N  A++ +   +  +F    P
Sbjct:  356 VHGGLSPSLSHMDDIREIPRPTDVPDYGLLNDLLWSDPADTENDWEDNERGVSFVFNKNVIRQFLAKHDFDLICRAHMVVEDGYEFFNDRTLCTVFSAPNYCGEFDNWGAVMSVNSELLCSFELIKP 482          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPT1_YEAST (Serine/threonine-protein phosphatase T OS=Saccharomyces cerevisiae GN=PPT1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.532e-19
Identity = 53/132 (40.15%), Postives = 73/132 (55.30%), Query Frame = -1
Query:  405 LHGGL-SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMA---------AILEIGENMEQNFL 770
            +HGGL S    TL + + +DR  + P +G   +LLW+DP +  G G S RG G+ FG DI  +F   N L  I R+H+L M G  + Q   ++TVFSAPNYC   GN+           IL+ G N +QN +
Sbjct:  358 MHGGLPSDPSATLSDFKNIDRFAQPPRDGAFMELLWADPQEANGMGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQNLI 489          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2BB_RAT (Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp3cb PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19
Identity = 58/142 (40.85%), Postives = 75/142 (52.82%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISP--------RGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP + TLD+IR LDR +E P  GPMCDLLWSDP +  G   S         RG  Y +      +F   N L  I RAH+    GY   +        +++T+FSAPNY     N AA+L+  EN   N  QF+ +P
Sbjct:  207 VHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSP 347          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2BB_MOUSE (Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Mus musculus GN=Ppp3cb PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19
Identity = 58/142 (40.85%), Postives = 75/142 (52.82%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISP--------RGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP + TLD+IR LDR +E P  GPMCDLLWSDP +  G   S         RG  Y +      +F   N L  I RAH+    GY   +        +++T+FSAPNY     N AA+L+  EN   N  QF+ +P
Sbjct:  207 VHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSP 347          
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PPP5_ARATH3.896e-2345.04Serine/threonine-protein phosphatase 5 OS=Arabidop... [more]
YT91_CAEEL4.307e-2242.64Putative serine/threonine-protein phosphatase C06A... [more]
PPT1_SCHPO4.307e-2241.22Serine/threonine-protein phosphatase T OS=Schizosa... [more]
PPZ2_YEAST9.596e-2240.16Serine/threonine-protein phosphatase PP-Z2 OS=Sacc... [more]
PPZ1_YEAST9.596e-2240.94Serine/threonine-protein phosphatase PP-Z1 OS=Sacc... [more]
PPY_DROME2.138e-2140.98Serine/threonine-protein phosphatase PP-Y OS=Droso... [more]
PPZ_SCHPO2.792e-2140.16Serine/threonine-protein phosphatase PP-Z OS=Schiz... [more]
PPT1_YEAST1.532e-1940.15Serine/threonine-protein phosphatase T OS=Saccharo... [more]
PP2BB_RAT2.613e-1940.85Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BB_MOUSE2.613e-1940.85Serine/threonine-protein phosphatase 2B catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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