CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPQ1_YEAST (Serine/threonine-protein phosphatase PPQ OS=Saccharomyces cerevisiae GN=PPQ1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17
Identity = 47/127 (37.01%), Postives = 65/127 (51.18%), Query Frame = -1
Query:  393 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDP 770
            +HGG+SP L  +  I  + R  ++P  G + DLLWSDPD +   W  + RG  YTF +     F       LI R H +V +GY +   K  VT+FSAPNYC    N  A++ +   M  +F    P
Sbjct:  409 VHGGISPDLHDMKQIEKVARPTDIPESGLVTDLLWSDPDPQVTDWSENDRGVSYTFSKRNVLDFCAKFKFDLILRGHMVVEDGYEFFARKKFVTIFSAPNYCGEFHNWGAVMSVTTGMMCSFELLKP 535          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2B_ASPFU (Serine/threonine-protein phosphatase 2B catalytic subunit OS=Aspergillus fumigatus GN=cnaA PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGW--------GISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQD------KNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP L TL++I+++DR +E P  G MCD+LW+DP +  G           S RG  Y F    A  F   N L  I RAH+    GY   +        +V+T+FSAPNY     N AA+L+  EN   N  QF+  P
Sbjct:  196 IHGGLSPELHTLEDIKSIDRFREPPTHGLMCDILWADPLEEFGQEKTGDYFVHNSVRGCSYFFSYPAACAFLEKNNLLSIIRAHEAQDAGYRMYRKTRTTGFPSVMTIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCTP 336          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2B1_CRYNV (Serine/threonine-protein phosphatase 2B catalytic subunit A1 OS=Cryptococcus neoformans var. grubii GN=CNA1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17
Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGIS--------PRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQD------KNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP L TLD++R+++R +E P +G MCD+LW+DP +  G   +         RG  Y F  + A QF   N L  I RAH+    GY   +        +V+T+FSAPNY     N AA+L+   N+  N  QF+  P
Sbjct:  228 IHGGLSPELHTLDDLRSINRFREPPTQGLMCDILWADPLEDFGSEKTNENFLHNHVRGCSYFFTYNAACQFLERNNLLSIIRAHEAQDAGYRMYRKTKTTGFPSVMTIFSAPNYLDVYSNKAAVLKYESNV-MNIRQFNCTP 368          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2B3_DROME (Serine/threonine-protein phosphatase 2B catalytic subunit 3 OS=Drosophila melanogaster GN=CanA-14F PE=1 SV=4)

HSP 1 Score: 89.7373 bits (221), Expect = 1.873e-17
Identity = 56/142 (39.44%), Postives = 73/142 (51.41%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG--------WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP +  L++IR LDR +E P  GPMCDLLWSDP +  G           S RG  Y +       F   N L  I RAH+    GY   +        +++T+FSAPNY     N AA+L+  EN   N  QF+ +P
Sbjct:  272 VHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSP 412          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2B2_DROME (Serine/threonine-protein phosphatase 2B catalytic subunit 2 OS=Drosophila melanogaster GN=Pp2B-14D PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.873e-17
Identity = 56/142 (39.44%), Postives = 73/142 (51.41%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG--------WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP +  L++IR LDR +E P  GPMCDLLWSDP +  G           S RG  Y +       F   N L  I RAH+    GY   +        +++T+FSAPNY     N AA+L+  EN   N  QF+ +P
Sbjct:  264 VHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSP 404          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2B_EMENI (Serine/threonine-protein phosphatase 2B catalytic subunit OS=Emericella nidulans GN=cnaA PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.194e-17
Identity = 55/142 (38.73%), Postives = 74/142 (52.11%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGW--------GISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQD------KNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP L TL++I+++DR +E P  G MCD+LW+DP +  G           S RG  Y F    A  F   N L  + RAH+    GY   +        +V+T+FSAPNY     N AA+L+  EN   N  QF+  P
Sbjct:  196 IHGGLSPELHTLEDIKSIDRFREPPTHGLMCDILWADPLEDFGQEKTGDYFIHNSVRGCSYFFSYPAACAFLEKNNLLSVIRAHEAQDAGYRMYRKTRTTGFPSVMTIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCTP 336          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2BC_MOUSE (Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform OS=Mus musculus GN=Ppp3cc PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.449e-17
Identity = 54/142 (38.03%), Postives = 73/142 (51.41%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG--------WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGG+SP +  L++IR LDR  E P  GP+CDLLWSDP +  G           + RG  Y F      +F   N L  I RAH+    GY   +        +++T+FSAPNY     N AA+L+  EN   N  QF+ +P
Sbjct:  194 VHGGMSPEITCLEDIRKLDRFSEPPAFGPVCDLLWSDPLEDYGSEKTLEHYTHNTVRGCSYFFSYPAVCEFLQNNSLLSIIRAHEAQDAGYRMYRKNQATGFPSLITIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSP 334          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2BA_DICDI (Calcineurin subunit A OS=Dictyostelium discoideum GN=canA PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.449e-17
Identity = 54/141 (38.30%), Postives = 68/141 (48.23%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGI-------SPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP + TLD+I  +DR +E P  GPMCDLLWSDP +     I         RG  Y +       F   N L  + RAH+    GY            +V+T+FSAPNY     N  A+L   EN   N  QF  +P
Sbjct:  248 IHGGLSPDIKTLDDIANIDRFKEPPSSGPMCDLLWSDPMEEFSPEIREHFVPNDVRGCSYLYSYRAVCSFLQKNKLLSVIRAHEAQNAGYKMHLQNDATGFPSVITLFSAPNYLDAYNNKGAVLRY-ENNVMNIRQFTCSP 387          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2B1_YEAST (Serine/threonine-protein phosphatase 2B catalytic subunit A1 OS=Saccharomyces cerevisiae GN=CNA1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.868e-16
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDP-----DDRCGWGI----------SPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNV------VTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGG+SP L +++++  ++R +E+P  G MCDLLW+DP     D R G             S RG  + F    + +F   NGL  I RAH+    GY   ++  V      +T+FSAPNY     N AA+L+  EN+  N  QF  +P
Sbjct:  227 VHGGISPELKSVEDVNKINRFREIPSRGLMCDLLWADPVENYDDARDGSEFDQSEDEFVPNSLRGCSFAFTFKASCKFLKANGLLSIIRAHEAQDAGYRMYKNNKVTGFPSLITMFSAPNYLDTYHNKAAVLKYEENV-MNIRQFHMSP 374          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2B_SCHPO (Serine/threonine-protein phosphatase 2B catalytic subunit OS=Schizosaccharomyces pombe GN=ppb1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.342e-15
Identity = 54/142 (38.03%), Postives = 72/142 (50.70%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGIS--------PRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQD------KNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP L TL++IR ++R  E P  G MCDLLWSDP +  G   S         RG  Y +       F   N L  + RAH+    GY   +        +++T+FSAPNY     N AA+L+  EN   N  QF+ +P
Sbjct:  227 VHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSDPLEDFGSEKSNKHFIHNNVRGCSYFYSYQAVCTFLENNNLLSVIRAHEAQDVGYRMYRKTKTTGFPSLMTIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSP 367          
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PPQ1_YEAST1.434e-1737.01Serine/threonine-protein phosphatase PPQ OS=Saccha... [more]
PP2B_ASPFU1.434e-1739.44Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2B1_CRYNV1.434e-1738.73Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2B3_DROME1.873e-1739.44Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2B2_DROME1.873e-1739.44Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2B_EMENI3.194e-1738.73Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BC_MOUSE5.449e-1738.03Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_DICDI5.449e-1738.30Calcineurin subunit A OS=Dictyostelium discoideum ... [more]
PP2B1_YEAST7.868e-1635.57Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2B_SCHPO1.342e-1538.03Serine/threonine-protein phosphatase 2B catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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