CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: BSU1_ARATH (Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana GN=BSU1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14
Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = -1
Query:  420 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMC--DLLWSDP---DDRCGWGISPRGAGY-TFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENM 770
            +HGG+  ++ T++ I  ++R    P  G M   D+LWSDP   D   G   + RG G  +FG DI   F   NGL +I RAH+ V++G+    D  ++TVFSA NYC    N  AIL IG +M
Sbjct:  628 VHGGIGRAV-TIEEIENIER-PAFPDTGSMVLKDILWSDPTMNDTVLGIVDNARGEGVVSFGPDIVKAFLERNGLEMILRAHECVIDGFERFADGRLITVFSATNYCGTAQNAGAILVIGRDM 748          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1L_ENCCU (Probable serine/threonine-protein phosphatase ECU05_0440 OS=Encephalitozoon cuniculi GN=ECU05_0440 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = -1
Query:  471 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNY 767
            HGGL  +   +DN++ + R+ +   +  +  LLWSDP++  G   S R AG  FG D+ ++F   NGL L+ R+HQ V +GY       VVT+FSAP Y
Sbjct:  309 HGGLPEAPVKVDNLQEIYRMTDTHTDELLKGLLWSDPEEILGTEESKRRAGVVFGADVTARFLERNGLDLLVRSHQAVDDGYRVHHGGKVVTIFSAPEY 407          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: BSL1_ORYSJ (Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.364e-14
Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = -1
Query:  420 LHGGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDPDDRCGW-GISPRGAG---YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENM 770
            +HGG+  S++T++ I  L+R I        + DLLWSDP +     G+ P   G    TFG D  ++F   N L LI RAH+ VM+G+       ++T+FSA NYC    N  AIL +G  +
Sbjct:  704 MHGGIGRSINTIEQIEKLERPITMDVGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKRNRLQLIIRAHECVMDGFERFAHGQLITLFSATNYCGTANNAGAILVVGRGL 825          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: BSL2_ORYSJ (Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonica GN=BSL2 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = -1
Query:  363 LHGGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDPDDRCGW-GISPRGAG---YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQI-EPDTT 770
            +HGG+  S++ ++ I  L R I        + DLLWSDP +     G+ P   G    TFG D   +F + N L LI RAH+ VM+G+      +++T+FSA NYC    N  AIL +G ++        P P  I  P+T+
Sbjct:  829 MHGGIGRSINHVEQIENLQRPITMEAGSVVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAITSPETS 970          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: BSL1_ARATH (Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = -1
Query:  420 LHGGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDPDDRCGW-GISPRGAG---YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENM 770
            +HGG+  S+ T++ I  ++R I        + DLLWSDP +     G+ P   G    TFG D  ++F   N L LI RAH+ VM+G+       ++T+FSA NYC    N  AIL +G  +
Sbjct:  702 MHGGIGRSISTVEQIEKIERPITMDAGSLVLMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHECVMDGFERFAPGQLITLFSATNYCGTANNAGAILVVGRGL 823          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: BSL3_ARATH (Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 49/142 (34.51%), Postives = 73/142 (51.41%), Query Frame = -1
Query:  363 LHGGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDPDDRCGW-GISPRGAG---YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQI-EPDTT 770
            +HGG+  S++ ++ I  + R I        + DLLWSDP +     G+ P   G    TFG D   +F + N L LI RAH+ VM+G+      +++T+FSA NYC    N  AIL +G ++        P P  I  P+T+
Sbjct:  827 MHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAITSPETS 968          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: BSL2_ARATH (Serine/threonine-protein phosphatase BSL2 OS=Arabidopsis thaliana GN=BSL2 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13
Identity = 44/122 (36.07%), Postives = 66/122 (54.10%), Query Frame = -1
Query:  420 LHGGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDPDDRCGW-GISPRGAG---YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENM 770
            +HGG+  S++ ++ I  + R I        + DLLWSDP +     G+ P   G    TFG D   +F + N L LI RAH+ VM+G+      +++T+FSA NYC    N  AIL +G ++
Sbjct:  838 MHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 959          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPE1_RAT (Serine/threonine-protein phosphatase with EF-hands 1 OS=Rattus norvegicus GN=Ppef1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11
Identity = 35/94 (37.23%), Postives = 50/94 (53.19%), Query Frame = -1
Query:  399 DLLWSDPDDRCG-WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQF 677
            DLLWSDP  + G +  + RG G  FG D+ S+  + N L ++ R+H+   +GY  C D  V+TVFSA NY     N  A + +       F Q+
Sbjct:  348 DLLWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLNKNQLKMVIRSHECKPDGYEICHDGKVITVFSASNYYEEGSNRGAYIRLSYGTSPQFFQY 441          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: RDGC_DROME (Serine/threonine-protein phosphatase rdgC OS=Drosophila melanogaster GN=rdgC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGP---------------MCDLLWSDPDDRCGWGISP-RGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGG S S  +LD I+++DR + V    P               + D++WSDP    G   +  RGAG  FG D+   F   + LS + R+H+    G+ +  D  ++T+FSA NY     N  A + +   +  +F+Q+  A  Q
Sbjct:  270 VHGGFSDST-SLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFVQYISAASQ 414          
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
BSU1_ARATH4.317e-1440.65Serine/threonine-protein phosphatase BSU1 OS=Arabi... [more]
PP1L_ENCCU5.639e-1440.40Probable serine/threonine-protein phosphatase ECU0... [more]
BSL1_ORYSJ7.364e-1437.70Serine/threonine-protein phosphatase BSL1 homolog ... [more]
BSL2_ORYSJ1.256e-1335.21Serine/threonine-protein phosphatase BSL2 homolog ... [more]
BSL1_ARATH1.256e-1336.89Serine/threonine-protein phosphatase BSL1 OS=Arabi... [more]
BSL3_ARATH2.798e-1334.51Serine/threonine-protein phosphatase BSL3 OS=Arabi... [more]
BSL2_ARATH3.655e-1336.07Serine/threonine-protein phosphatase BSL2 OS=Arabi... [more]
PPE1_RAT3.421e-1137.23Serine/threonine-protein phosphatase with EF-hands... [more]
RDGC_DROME5.835e-1130.14Serine/threonine-protein phosphatase rdgC OS=Droso... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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