CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2AA_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Sus scrofa GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.976e-68
Identity = 113/141 (80.14%), Postives = 129/141 (91.49%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGL+L+SRAHQLVMEGYNWC D+NVVT+FSAPNYCYRCGN AAI+E+ + ++ +FLQFDPAPR+ EP  TR+TPD
Sbjct:  166 LHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPD 306
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2AA_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus GN=Ppp2ca PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.976e-68
Identity = 113/141 (80.14%), Postives = 129/141 (91.49%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGL+L+SRAHQLVMEGYNWC D+NVVT+FSAPNYCYRCGN AAI+E+ + ++ +FLQFDPAPR+ EP  TR+TPD
Sbjct:  166 LHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPD 306
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2AA_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Homo sapiens GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.976e-68
Identity = 113/141 (80.14%), Postives = 129/141 (91.49%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGL+L+SRAHQLVMEGYNWC D+NVVT+FSAPNYCYRCGN AAI+E+ + ++ +FLQFDPAPR+ EP  TR+TPD
Sbjct:  166 LHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPD 306
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.976e-68
Identity = 113/141 (80.14%), Postives = 129/141 (91.49%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGL+L+SRAHQLVMEGYNWC D+NVVT+FSAPNYCYRCGN AAI+E+ + ++ +FLQFDPAPR+ EP  TR+TPD
Sbjct:  166 LHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPD 306
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2AA_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Bos taurus GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.976e-68
Identity = 113/141 (80.14%), Postives = 129/141 (91.49%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGL+L+SRAHQLVMEGYNWC D+NVVT+FSAPNYCYRCGN AAI+E+ + ++ +FLQFDPAPR+ EP  TR+TPD
Sbjct:  166 LHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPD 306
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A_DROME (Serine/threonine-protein phosphatase PP2A OS=Drosophila melanogaster GN=mts PE=1 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.396e-67
Identity = 111/141 (78.72%), Postives = 131/141 (92.91%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+D+LD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FN+TNGL+L+SRAHQLVMEGYNWC D+NVVT+FSAPNYCYRCGN AA++E+ ++++ +FLQFDPAPR+ EP  TR+TPD
Sbjct:  166 LHGGLSPSIDSLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAALMELDDSLKFSFLQFDPAPRRGEPHVTRRTPD 306
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.279e-66
Identity = 110/141 (78.01%), Postives = 127/141 (90.07%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS++TLDNIR  DR+QEVPHEG MCDLLWSDPDDRCGWGISPRGAGYTFGQDI+ QFNHTN L LI+RAHQLVMEG+NW  D+ VVT+FSAPNYCYRCGNMA+ILE+ ++ E+ F+QF+PAPR+ EPD TR+TPD
Sbjct:  169 LHGGLSPSIETLDNIRNFDRVQEVPHEGAMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGFNWAHDQKVVTIFSAPNYCYRCGNMASILEVDDSRERTFIQFEPAPRRGEPDVTRRTPD 309
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.182e-66
Identity = 110/141 (78.01%), Postives = 126/141 (89.36%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS++TLDNIR  DR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+ QFNHTN L LI+RAHQLVMEG+NW  ++ VVT+FSAPNYCYRCGNMA+ILE+ +  E  F+QF+PAPR+ EPD TR+TPD
Sbjct:  164 LHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCREHTFIQFEPAPRRGEPDVTRRTPD 304
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 2.182e-66
Identity = 110/141 (78.01%), Postives = 126/141 (89.36%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS++TLDNIR  DR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+ QFNHTN L LI+RAHQLVMEG+NW  ++ VVT+FSAPNYCYRCGNMA+ILE+ +  E  F+QF+PAPR+ EPD TR+TPD
Sbjct:  164 LHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCREHTFIQFEPAPRRGEPDVTRRTPD 304
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 2.849e-66
Identity = 108/141 (76.60%), Postives = 126/141 (89.36%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+D LD++R+LDR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+ QFNHTN L L++RAHQLVMEGYNW  ++ VVT+FSAPNYCYRCGNMA+ILE+ +     F+QF+PAPR+ EPD TR+TPD
Sbjct:  171 LHGGLSPSIDNLDSVRSLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPD 311
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP2AA_PIG3.976e-6880.14Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_MOUSE3.976e-6880.14Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_HUMAN3.976e-6880.14Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_CHICK3.976e-6880.14Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_BOVIN3.976e-6880.14Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A_DROME4.396e-6778.72Serine/threonine-protein phosphatase PP2A OS=Droso... [more]
PP2A_TOBAC1.279e-6678.01Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_ORYSJ2.182e-6678.01Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A2_ORYSI2.182e-6678.01Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A4_ORYSJ2.849e-6676.60Serine/threonine-protein phosphatase PP2A-4 cataly... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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