CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 4.860e-66
Identity = 109/141 (77.30%), Postives = 125/141 (88.65%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS++TLDNIR  DR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+ QFNHTN L LI+RAHQLVM+GYNW  ++ VVT+FSAPNYCYRCGNMA+ILE+ +     F+QF+PAPR+ EPD TR+TPD
Sbjct:  170 LHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPD 310          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.290e-66
Identity = 107/141 (75.89%), Postives = 126/141 (89.36%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+D LD++R+LDR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+ QFNH+N L L++RAHQLVMEGYNW  ++ VVT+FSAPNYCYRCGNMA+ILE+ +     F+QF+PAPR+ EPD TR+TPD
Sbjct:  172 LHGGLSPSIDNLDSVRSLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHSNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPD 312          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.414e-65
Identity = 108/141 (76.60%), Postives = 125/141 (88.65%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS++TLDNIR  DR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+ QFNHTN L LI+RAHQLVM+G+NW  ++ VVT+FSAPNYCYRCGNMA+ILE+ +     F+QF+PAPR+ EPD TR+TPD
Sbjct:  170 LHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPD 310          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A2_SCHPO (Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa2 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.414e-65
Identity = 110/141 (78.01%), Postives = 124/141 (87.94%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+D+LD++R LDR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+  FNH NGLSL +RAHQLVMEG+NW  D +VVT+FSAPNYCYRCGN AAILE+ + M Q FLQFDPAPR+ EP   R+TPD
Sbjct:  179 LHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISETFNHANGLSLTARAHQLVMEGFNWAHDGDVVTIFSAPNYCYRCGNQAAILEVDDTMNQVFLQFDPAPREGEPVIARRTPD 319          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2AA_DICDI (Serine/threonine-protein phosphatase 2A catalytic subunit A OS=Dictyostelium discoideum GN=pho2A PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.847e-65
Identity = 110/141 (78.01%), Postives = 126/141 (89.36%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+DTLD+I  LDR+QEVPHEG MCDLLWSDPDDR G+G SPRGAGYTFG+DI+ QFNH NGL+L++RAHQLVMEGYNWC D+NVVT+FSAPNYCYRCGN+AAI+EI E M+  FLQFDPAPR+ EP  TR+TPD
Sbjct:  163 LHGGLSPSIDTLDHIENLDRVQEVPHEGAMCDLLWSDPDDRLGFGYSPRGAGYTFGKDISEQFNHNNGLTLVARAHQLVMEGYNWCHDQNVVTIFSAPNYCYRCGNLAAIMEIDEKMKHTFLQFDPAPRRGEPHVTRRTPD 303          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A_MEDSA (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa GN=PP2A PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.412e-65
Identity = 108/141 (76.60%), Postives = 125/141 (88.65%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS++TLDNIR  DR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+ QFNHTN L LI+RAHQLVM+G+NW  ++ VVT+FSAPNYCYRCGNMA+ILE+ +     F+QF+PAPR+ EPD TR+TPD
Sbjct:  170 LHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPD 310          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 2.258e-63
Identity = 106/141 (75.18%), Postives = 122/141 (86.52%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS++TLDNIR  DR+QEVPH GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI++QFNH+N L LISRAHQLVM+GYNW  +    T+FSAPNYCYRCGNMA+ILE+ +     F+QF+PAPR+ EPD TR+TPD
Sbjct:  166 LHGGLSPSIETLDNIRNFDRVQEVPHGGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISNQFNHSNSLKLISRAHQLVMDGYNWAHEAKGGTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPD 306          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.029e-63
Identity = 105/141 (74.47%), Postives = 123/141 (87.23%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS++TLDN+R+ DR+QEVPHEG MCDLLWSDPDD CGWG+SPRGAGYTFGQDI+ QF+ TN L LI+RAHQLVMEGYNW  ++ VVT+FSAPNYCYRCGNMA+ILE+ +     F+QFDPAPR+ EPD TR+TPD
Sbjct:  171 LHGGLSPSIETLDNVRSFDRVQEVPHEGAMCDLLWSDPDDCCGWGMSPRGAGYTFGQDISEQFHQTNNLKLIARAHQLVMEGYNWSHEQKVVTIFSAPNYCYRCGNMASILEVDDCRGHTFIQFDPAPRRGEPDVTRRTPD 311          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A_ACECL (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.911e-62
Identity = 108/142 (76.06%), Postives = 123/142 (86.62%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ-IEPDTTRKTPD 770
            LHGGLSP+LDTLD IR LDRIQEVPHEGPMCDLLWSDPD+R GWGISPRGAGYTFGQDI+ QFN  N L L++RAHQLVMEGYNW  +KNVVT+FSAPNYCYRCGNMAAI+E+ E M++ F QF+PAPR+  E +  R+TPD
Sbjct:  163 LHGGLSPALDTLDQIRELDRIQEVPHEGPMCDLLWSDPDERLGWGISPRGAGYTFGQDISEQFNVRNSLKLVARAHQLVMEGYNWSHEKNVVTIFSAPNYCYRCGNMAAIMEVAEGMDKGFQQFEPAPRRGAEGEVNRRTPD 304          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A2_YEAST (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH22 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.260e-62
Identity = 106/141 (75.18%), Postives = 122/141 (86.52%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSP ++T+D +R L+RIQEVPHEGPMCDLLWSDPDDR GWGISPRGAG+TFGQDI+ QFNHTN LSLI+RAHQLVMEGY+W   +NVVT+FSAPNYCYRCGN AAI+E+ EN  + FLQ+DP+ R  EP  TRKTPD
Sbjct:  234 LHGGLSPMIETIDQVRDLNRIQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGFTFGQDISEQFNHTNDLSLIARAHQLVMEGYSWSHQQNVVTIFSAPNYCYRCGNQAAIMEVDENHNRQFLQYDPSVRPGEPTVTRKTPD 374          
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP2A4_ARATH4.860e-6677.30Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A4_ORYSI8.290e-6675.89Putative serine/threonine-protein phosphatase PP2A... [more]
PP2A3_ARATH1.414e-6576.60Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A2_SCHPO1.414e-6578.01Major serine/threonine-protein phosphatase PP2A-2 ... [more]
PP2AA_DICDI1.847e-6578.01Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A_MEDSA2.412e-6576.60Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A_BRANA2.258e-6375.18Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A5_TOBAC5.029e-6374.47Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A_ACECL1.911e-6276.06Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A2_YEAST3.260e-6275.18Serine/threonine-protein phosphatase PP2A-2 cataly... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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