CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A1_YEAST (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH21 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.618e-61
Identity = 104/141 (73.76%), Postives = 121/141 (85.82%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSP ++T+D +R L+RIQEVPHEGPMCDLLWSDPDDR GWGISPRGAG+TFGQD++ QFNHTN LSLI+RAHQLVMEGY W   +NVVT+FSAPNYCYRCGN AAI+E+ EN  + FLQ+DP+ R  EP  +RKTPD
Sbjct:  226 LHGGLSPMIETIDQVRELNRIQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGFTFGQDVSEQFNHTNDLSLIARAHQLVMEGYAWSHQQNVVTIFSAPNYCYRCGNQAAIMEVDENHNRQFLQYDPSVRPGEPSVSRKTPD 366
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A1_SCHPO (Minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.370e-60
Identity = 104/141 (73.76%), Postives = 120/141 (85.11%), Query Frame = -1 
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD 770
            LHGGLSPS+DTLD++R LDR+QEVPHEGP+CDLLWSDPDDR GWGISPRGAGYTFG DIA  FNH NGL LI+RAHQLVMEGYNW  + NVVT+FSAPNYCYRCGN AAI+ I +++   F+Q+D APR+ E   TR+TPD
Sbjct:  166 LHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWSDPDDRPGWGISPRGAGYTFGPDIAEAFNHNNGLDLIARAHQLVMEGYNWTTNHNVVTIFSAPNYCYRCGNQAAIMGIDDHINYAFIQYDTAPRKEELHVTRRTPD 306
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_XENTR (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus tropicalis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50
Identity = 85/138 (61.59%), Postives = 111/138 (80.43%), Query Frame = -1 
Query:  357 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRK 770
            +HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +I RAHQLVMEGY W  ++ V+TV+SAPNYCYRCGN+AAILE+ E++++ F+ F+ AP++     ++K
Sbjct:  163 VHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQETRGIPSKK 300
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_XENLA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus laevis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50
Identity = 85/138 (61.59%), Postives = 111/138 (80.43%), Query Frame = -1 
Query:  357 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRK 770
            +HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +I RAHQLVMEGY W  ++ V+TV+SAPNYCYRCGN+AAILE+ E++++ F+ F+ AP++     ++K
Sbjct:  163 VHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQETRGIPSKK 300
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_RABIT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Oryctolagus cuniculus GN=PPP4C PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50
Identity = 85/138 (61.59%), Postives = 112/138 (81.16%), Query Frame = -1 
Query:  357 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRK 770
            +HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +I RAHQLVMEGY W  ++ V+TV+SAPNYCYRCGN+AAILE+ E+++++F+ F+ AP++     ++K
Sbjct:  163 VHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETRGIPSKK 300
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_PONAB (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Pongo abelii GN=PPP4C PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50
Identity = 85/138 (61.59%), Postives = 112/138 (81.16%), Query Frame = -1 
Query:  357 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRK 770
            +HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +I RAHQLVMEGY W  ++ V+TV+SAPNYCYRCGN+AAILE+ E+++++F+ F+ AP++     ++K
Sbjct:  163 VHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETRGIPSKK 300
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_MOUSE (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Mus musculus GN=Ppp4c PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50
Identity = 85/138 (61.59%), Postives = 112/138 (81.16%), Query Frame = -1 
Query:  357 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRK 770
            +HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +I RAHQLVMEGY W  ++ V+TV+SAPNYCYRCGN+AAILE+ E+++++F+ F+ AP++     ++K
Sbjct:  163 VHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETRGIPSKK 300
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_HUMAN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Homo sapiens GN=PPP4C PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50
Identity = 85/138 (61.59%), Postives = 112/138 (81.16%), Query Frame = -1 
Query:  357 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRK 770
            +HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +I RAHQLVMEGY W  ++ V+TV+SAPNYCYRCGN+AAILE+ E+++++F+ F+ AP++     ++K
Sbjct:  163 VHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETRGIPSKK 300
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_BOVIN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Bos taurus GN=PPP4C PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50
Identity = 85/138 (61.59%), Postives = 112/138 (81.16%), Query Frame = -1 
Query:  357 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRK 770
            +HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +I RAHQLVMEGY W  ++ V+TV+SAPNYCYRCGN+AAILE+ E+++++F+ F+ AP++     ++K
Sbjct:  163 VHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETRGIPSKK 300
[Close]
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4CA_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit A OS=Danio rerio GN=ppp4ca PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50
Identity = 85/130 (65.38%), Postives = 108/130 (83.08%), Query Frame = -1 
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N +S+I RAHQLVMEGY W  +  V+TV+SAPNYCYRCGN+AAILE+ E++++ F+ F+ AP++
Sbjct:  167 VHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDISMICRAHQLVMEGYKWHFNDTVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQE 296
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP2A1_YEAST1.618e-6173.76Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_SCHPO1.370e-6073.76Minor serine/threonine-protein phosphatase PP2A-1 ... [more]
PP4C_XENTR4.883e-5061.59Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENLA4.883e-5061.59Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_RABIT4.883e-5061.59Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_PONAB4.883e-5061.59Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_MOUSE4.883e-5061.59Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_HUMAN4.883e-5061.59Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_BOVIN4.883e-5061.59Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CA_DANRE4.883e-5065.38Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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