CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: FYPP_PEA (Phytochrome-associated serine/threonine protein phosphatase OS=Pisum sativum GN=FYPP PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.507e-40
Identity = 73/120 (60.83%), Postives = 92/120 (76.67%), Query Frame = -1
Query:  414 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWC-QDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQ 770
            +HGGLSP + T+D IR ++R  E+PHEGP CDL+WSDP+D   W +SPRGAG+ FG  + S+FNH N L L+ RAHQLV EG  +  QDK +VTV+SAPNYCYRCGN+A+IL   ENME+
Sbjct:  159 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMER 278          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_YEAST (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH3 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = -1
Query:  375 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIE 770
            +HGGLSP + T+D IR +DR QEVPHEG MCDLLWSDP+D   W +SPRGAG+ FG+    QF   N + LI+RAHQLVMEGY    D  +VTV+SAPNYCYRCGN+AA+L+I +++ + +  F+    Q E
Sbjct:  160 VHGGLSPDMTTVDEIRTIDRKQEVPHEGAMCDLLWSDPEDVDTWSLSPRGAGFLFGKREVDQFLEKNNVELIARAHQLVMEGYKEMFDGGLVTVWSAPNYCYRCGNVAAVLKIDDDLNREYTIFEAVQAQNE 291          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP4C_KLULA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Kluyveromyces lactis GN=PPH3 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 73/125 (58.40%), Postives = 97/125 (77.60%), Query Frame = -1
Query:  396 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFD 770
            +HGGLSP + +++ IR +DR +EVPHEG MCDLLWSDP+D   W +SPRGAG+ FGQ+   +F HTN + LI+RAHQLVMEGY    D  +VTV+SAPNYCYRCGN+AA+L I ++M +++  F+
Sbjct:  160 VHGGLSPDVLSINEIRTIDRKKEVPHEGAMCDLLWSDPEDVDTWSLSPRGAGFLFGQNEVDKFLHTNSVELIARAHQLVMEGYKEMFDGGLVTVWSAPNYCYRCGNVAAVLRIDDDMTKDYTIFE 284          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPE1_SCHPO (Serine/threonine-protein phosphatase ppe1 OS=Schizosaccharomyces pombe GN=ppe1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.969e-39
Identity = 72/125 (57.60%), Postives = 96/125 (76.80%), Query Frame = -1
Query:  399 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNW-CQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQF 770
            +HGGLSP + TLD IR L R QE+PHEG  CDL+WSDP+D   W +SPRGAG+ FG  + ++F+  N L+LI+RAHQLV EGY +   DKN+VTV+SAPNYCYRCGN+A+++++ E++E  F  F
Sbjct:  160 VHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWSDPEDIESWTVSPRGAGWLFGSKVTTEFSQINDLTLIARAHQLVQEGYKYHFADKNLVTVWSAPNYCYRCGNVASVMKVDESLEPEFRIF 284          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: FYPP1_ARATH (Phytochrome-associated serine/threonine protein phosphatase 1 OS=Arabidopsis thaliana GN=FYPP1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.969e-39
Identity = 71/120 (59.17%), Postives = 92/120 (76.67%), Query Frame = -1
Query:  414 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWC-QDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQ 770
            +HGGLSP + T+D IR ++R  E+PHEGP CDL+WSDP+D   W +SPRGAG+ FG  + ++FNH N L L+ RAHQLV EG  +  QDK +VTV+SAPNYCYRCGN+A+IL   +NME+
Sbjct:  159 VHGGLSPDVRTIDQIRLIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNDNMER 278          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: YOU5_SCHPO (Putative serine/threonine-protein phosphatase C26H8.05c OS=Schizosaccharomyces pombe GN=SPBC26H8.05c PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.065e-39
Identity = 84/172 (48.84%), Postives = 103/172 (59.88%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYN-WCQDK-----------------------------------------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSPS+ ++D IR LDR QEVPHEG MCDLLWSDP+D  GWG+SPRGAG+ FG D++  FN  N LS I+RAHQLVMEGY     DK                                         +VVTV+SAPNYCYRCGN+A+IL++ EN  Q+F  F  A ++
Sbjct:  162 VHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSDPEDISGWGLSPRGAGFLFGADVSEVFNRANDLSFIARAHQLVMEGYKIHFSDKDKQYPKFTNEEDSELDSDSASPVDDSPAPGDIITIPEKDKGSVVTVWSAPNYCYRCGNVASILQLDENQTQSFKIFGTASQE 333          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: FYPP3_ARATH (Phytochrome-associated serine/threonine protein phosphatase 3 OS=Arabidopsis thaliana GN=FYPP3 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.065e-39
Identity = 71/120 (59.17%), Postives = 92/120 (76.67%), Query Frame = -1
Query:  414 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWC-QDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQ 770
            +HGGLSP + T+D IR ++R  E+PHEGP CDL+WSDP+D   W +SPRGAG+ FG  + ++FNH N L L+ RAHQLV EG  +  QDK +VTV+SAPNYCYRCGN+A+IL   +NME+
Sbjct:  159 VHGGLSPDVRTIDQIRLIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTTEFNHINKLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNDNMER 278          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPP6_RAT (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus GN=Ppp6c PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.128e-37
Identity = 73/139 (52.52%), Postives = 96/139 (69.06%), Query Frame = -1
Query:  363 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAIL---EIGENMEQNFLQFDPAPRQIEPDTT 770
            +HGGLSP + TLD IR ++R QE+PH+G  CDL+WSDP+D   W ISPRGAG+ FG  + ++F H N L LI RAHQLV EGY +  D+ +VTV+SAPNYCYRCGN+A+I+   ++     + F     + R I P TT
Sbjct:  162 VHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTT 300          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPP6_MOUSE (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Mus musculus GN=Ppp6c PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.128e-37
Identity = 73/139 (52.52%), Postives = 96/139 (69.06%), Query Frame = -1
Query:  363 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAIL---EIGENMEQNFLQFDPAPRQIEPDTT 770
            +HGGLSP + TLD IR ++R QE+PH+G  CDL+WSDP+D   W ISPRGAG+ FG  + ++F H N L LI RAHQLV EGY +  D+ +VTV+SAPNYCYRCGN+A+I+   ++     + F     + R I P TT
Sbjct:  162 VHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTT 300          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPP6_HUMAN (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Homo sapiens GN=PPP6C PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.128e-37
Identity = 73/139 (52.52%), Postives = 96/139 (69.06%), Query Frame = -1
Query:  363 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAIL---EIGENMEQNFLQFDPAPRQIEPDTT 770
            +HGGLSP + TLD IR ++R QE+PH+G  CDL+WSDP+D   W ISPRGAG+ FG  + ++F H N L LI RAHQLV EGY +  D+ +VTV+SAPNYCYRCGN+A+I+   ++     + F     + R I P TT
Sbjct:  162 VHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTT 300          
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
FYPP_PEA3.507e-4060.83Phytochrome-associated serine/threonine protein ph... [more]
PP4C_YEAST1.020e-3956.82Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_KLULA1.333e-3958.40Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPE1_SCHPO2.969e-3957.60Serine/threonine-protein phosphatase ppe1 OS=Schiz... [more]
FYPP1_ARATH2.969e-3959.17Phytochrome-associated serine/threonine protein ph... [more]
YOU5_SCHPO5.065e-3948.84Putative serine/threonine-protein phosphatase C26H... [more]
FYPP3_ARATH5.065e-3959.17Phytochrome-associated serine/threonine protein ph... [more]
PPP6_RAT2.128e-3752.52Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPP6_MOUSE2.128e-3752.52Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPP6_HUMAN2.128e-3752.52Serine/threonine-protein phosphatase 6 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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