CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2AB_DICDI (Probable serine/threonine-protein phosphatase 2A catalytic subunit B OS=Dictyostelium discoideum GN=DDB_G0283187 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35
Identity = 73/146 (50.00%), Postives = 100/146 (68.49%), Query Frame = -1
Query:  348 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEP----DTTRKTPD 770
            +HGGLSPS  ++D I+ LDR QEVP+EG + D+LWSDPD DR G+  S RGAGY++G+D+  +F   N +  I RAHQL M+GY    D  + TV+SAPNYC RCGNMA+I+E+ E +E+ F  +  AP+ +      DT ++ PD
Sbjct:  164 VHGGLSPSALSIDQIKVLDRFQEVPNEGALSDILWSDPDPDREGFVESQRGAGYSYGKDVTLRFLQNNKMQHIIRAHQLCMDGYQTLFDNKLSTVWSAPNYCNRCGNMASIVEVNEKLERYFNTYAAAPQSLSNKPTLDTNKELPD 309          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPH6_CAEEL (Putative serine/threonine-protein phosphatase pph-6 OS=Caenorhabditis elegans GN=pph-6 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.876e-34
Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = -1
Query:  369 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEI-GENMEQNFLQFDPAPRQIEPD 770
            +HGGLSP + T+D++  LDR QEVP++GP+CD++WSDPDD    W IS RGAG+ FG  +  +F   N LSL+ R+HQLV EG+ +  ++ + TV+SAPNYCYRCGN AA+ EI G N    +    P   + +PD
Sbjct:  188 VHGGLSPDIRTIDSLMLLDRAQEVPNKGPLCDIMWSDPDDDVEDWVISQRGAGFVFGAKVTEEFLMNNDLSLLCRSHQLVDEGFKYMFNEKLATVWSAPNYCYRCGNAAAVFEIDGNNRSTKYFNAVPDGSREKPD 323          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPP6_DROME (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Drosophila melanogaster GN=PpV PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.756e-34
Identity = 74/139 (53.24%), Postives = 91/139 (65.47%), Query Frame = -1
Query:  363 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAIL--EIGENMEQN-FLQFDPAPRQIEPDTT 770
            +HGGLSP + TLD IR +DR  E+P++G  CDL+WSDP+D   WG SPRGAG+ FG ++   F   N L+LI RAHQLV EG  +  D  +VTV+SAPNYCYRCGN+AAIL  E  E  +   FL    A R I    T
Sbjct:  160 VHGGLSPEIITLDQIRTIDRNGEIPYKGAFCDLVWSDPEDMEYWGQSPRGAGWLFGHNVTKDFMAINNLNLICRAHQLVNEGIKYMFDGKLVTVWSAPNYCYRCGNVAAILSFETAEKRQTKIFLAVPDAERVIPKQNT 298          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: YD44_SCHPO (Putative serine/threonine-protein phosphatase C22H10.04 OS=Schizosaccharomyces pombe GN=SPAC22H10.04 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.905e-34
Identity = 70/134 (52.24%), Postives = 91/134 (67.91%), Query Frame = -1
Query:  372 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEP 770
            +HGGLSPS+  +D I  LDR +E PHEGPM DL+WSDPD     + +SPRGAG++FG+ I ++F   N +  I RAHQL  EGY    +K + TV+SAPNYCYRC N+A+IL+I  +  + F  FD AP Q  P
Sbjct:  160 VHGGLSPSIQHIDQILVLDRFREFPHEGPMADLVWSDPDPSVQEFSLSPRGAGFSFGEVIVTKFLEYNNMKHILRAHQLCSEGYQILFEKKLSTVWSAPNYCYRCANLASILQIDTDQSRFFNVFDAAPNQETP 293          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP2A4_YEAST (Serine/threonine-protein phosphatase PP2A-like PPG1 OS=Saccharomyces cerevisiae GN=PPG1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.336e-31
Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = -1
Query:  387 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD----------DRCG--WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 770
            +HGGLSP++ T+D I+ +DR +E+PH+G M DL+WSDP+          D  G  + +SPRGAGYTFG+ +  +F   N ++ I RAHQL  EGY    D  V TV+SAPNYCYRCGN A+ILE+    +  F  F+ AP
Sbjct:  160 VHGGLSPNVQTIDQIKIIDRFREIPHDGAMADLVWSDPEENNNPTLDHPDNSGQHFQVSPRGAGYTFGRSVVEKFLRMNDMNRIYRAHQLCNEGYQIYFDGLVTTVWSAPNYCYRCGNKASILELYSKDQFYFNVFEEAP 299          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP14_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.633e-29
Identity = 64/131 (48.85%), Postives = 84/131 (64.12%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSP LD LD IR L R   +P  G +CDLLWSDP  D  GWG++ RG  YTFG D  S+F   + L L+ RAHQ+V +GY +  D+ +VTVFSAPNYC    N  A++ + EN+  +F    PA ++
Sbjct:  182 MHGGLSPDLDHLDEIRNLPRPTMIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKK 312          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.638e-29
Identity = 63/131 (48.09%), Postives = 84/131 (64.12%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSP L  LD I++L R  +VP  G +CDLLWSDP  D  GWG++ RG  YTFG D  S+F   + L LI RAHQ+V +GY +  D+ +VT+FSAPNYC    N  A++ + E +  +F    PA R+
Sbjct:  183 MHGGLSPDLTHLDEIKSLPRPTDVPDTGLLCDLLWSDPGKDVQGWGMNDRGVSYTFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAERK 313          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1G_RAT (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.205e-29
Identity = 61/137 (44.53%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  360 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTR 767
            HGGLSP L +++ IR + R  +VP +G +CDLLWSDPD D  GWG + RG  +TFG ++ ++F H + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E +  +F    PA ++ +P+ TR
Sbjct:  173 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK-KPNATR 308          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1G_MOUSE (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.205e-29
Identity = 61/137 (44.53%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  360 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTR 767
            HGGLSP L +++ IR + R  +VP +G +CDLLWSDPD D  GWG + RG  +TFG ++ ++F H + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E +  +F    PA ++ +P+ TR
Sbjct:  173 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK-KPNATR 308          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1G_HUMAN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Homo sapiens GN=PPP1CC PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.205e-29
Identity = 61/137 (44.53%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  360 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTR 767
            HGGLSP L +++ IR + R  +VP +G +CDLLWSDPD D  GWG + RG  +TFG ++ ++F H + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E +  +F    PA ++ +P+ TR
Sbjct:  173 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK-KPNATR 308          
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP2AB_DICDI5.795e-3550.00Probable serine/threonine-protein phosphatase 2A c... [more]
PPH6_CAEEL2.876e-3450.00Putative serine/threonine-protein phosphatase pph-... [more]
PPP6_DROME3.756e-3453.24Serine/threonine-protein phosphatase 6 catalytic s... [more]
YD44_SCHPO4.905e-3452.24Putative serine/threonine-protein phosphatase C22H... [more]
PP2A4_YEAST1.336e-3148.57Serine/threonine-protein phosphatase PP2A-like PPG... [more]
PP14_ARATH1.633e-2948.85Serine/threonine-protein phosphatase PP1 isozyme 4... [more]
PP1_ORYSJ3.638e-2948.09Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
PP1G_RAT6.205e-2944.53Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_MOUSE6.205e-2944.53Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_HUMAN6.205e-2944.53Serine/threonine-protein phosphatase PP1-gamma cat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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