CN188639

Overview
NameCN188639
Unique NameCN188639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1G_CANFA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Canis familiaris GN=PPP1CC PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.205e-29
Identity = 61/137 (44.53%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  360 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTR 767
            HGGLSP L +++ IR + R  +VP +G +CDLLWSDPD D  GWG + RG  +TFG ++ ++F H + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E +  +F    PA ++ +P+ TR
Sbjct:  173 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGETDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK-KPNATR 308          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1G_BOVIN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Bos taurus GN=PPP1CC PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.205e-29
Identity = 61/137 (44.53%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  360 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTR 767
            HGGLSP L +++ IR + R  +VP +G +CDLLWSDPD D  GWG + RG  +TFG ++ ++F H + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E +  +F    PA ++ +P+ TR
Sbjct:  173 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK-KPNATR 308          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP11_SCHPO (Serine/threonine-protein phosphatase PP1-1 OS=Schizosaccharomyces pombe GN=dis2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.104e-29
Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSP L+++D I+ + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F H + + L+ RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E++  +F    PA ++
Sbjct:  171 MHGGLSPDLNSMDQIQRIMRPTDVPDTGLLCDLLWSDPDKDLTGWGDNDRGVSFTFGPDVVSRFLHKHDMDLVCRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEKK 301          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1_BRAOL (Serine/threonine-protein phosphatase PP1 OS=Brassica oleracea GN=PP1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.058e-28
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGG+SP L +LD IR++ R  ++P  G +CDLLWSDP  D  GWG + RG  YTFG D  ++F   N + LI RAHQ+V +GY +  ++ VVTVFSAPNYC    N  A++ I E++  +F    P+ ++
Sbjct:  186 MHGGISPELMSLDQIRSISRPLDIPDSGLVCDLLWSDPSGDVKGWGANDRGVSYTFGADTVAEFLQKNDMDLICRAHQVVEDGYEFFAERQVVTVFSAPNYCGEFDNAGAMMSIDESLMCSFQILKPSEKK 316          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP11_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.058e-28
Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGG+SP L +LD IR + R  ++P  G +CDLLWSDP    GWG++ RG  YTFG D  ++F   + + LI RAHQ+V +GY +  ++ +VTVFSAPNYC    N  A++ I E++  +F    P+ ++
Sbjct:  185 MHGGISPELKSLDQIRNIARPMDIPESGLVCDLLWSDPSGDVGWGMNDRGVSYTFGADKVAEFLEKHDMDLICRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDESLMCSFQILKPSEKK 314          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PPIG_XENTR (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Xenopus tropicalis GN=ppp1cc PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.805e-28
Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  360 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTR 767
            HGGLSP L +++ IR + R  +VP +G +CDLLWSDPD D  GWG + RG  +TFG ++ ++F H + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E +  +F    PA ++ +P+ +R
Sbjct:  173 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK-KPNASR 308          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1GB_XENLA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit B OS=Xenopus laevis GN=ppp1cc-B PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.805e-28
Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  360 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTR 767
            HGGLSP L +++ IR + R  +VP +G +CDLLWSDPD D  GWG + RG  +TFG ++ ++F H + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E +  +F    PA ++ +P+ +R
Sbjct:  173 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK-KPNASR 308          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP1GA_XENLA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit A OS=Xenopus laevis GN=ppp1cc-A PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.805e-28
Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  360 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTR 767
            HGGLSP L +++ IR + R  +VP +G +CDLLWSDPD D  GWG + RG  +TFG ++ ++F H + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N  A++ + E +  +F    PA ++ +P+ +R
Sbjct:  173 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK-KPNASR 308          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP12_SCHPO (Serine/threonine-protein phosphatase PP1-2 OS=Schizosaccharomyces pombe GN=sds21 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.358e-28
Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSP L++LD I+ + R  ++P  G +CDL+WSDP+ D  GWG + RG  YTFG D+ S+F   + L LI RAHQ+V +GY +   + +VT+FSAPNYC    N+ A++ + E++  +F    PA ++
Sbjct:  168 MHGGLSPDLNSLDQIQRIIRPTDIPDTGLLCDLVWSDPEKDLTGWGENDRGVSYTFGADVVSRFLQKHDLDLICRAHQVVEDGYEFFGKRQLVTIFSAPNYCGEFDNVGAMMSVNEDLLCSFQILKPAEKR 298          
BLAST of CN188639 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.253e-28
Identity = 58/131 (44.27%), Postives = 82/131 (62.60%), Query Frame = -1
Query:  381 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 770
            +HGGLSP L  LD IR L R  ++P  G +CDLLWSDP     GWG++ RG  YTFG D  ++F   + + L+ RAHQ+V +GY +  ++ +VT+FSAPNYC    N  A++ + EN+  +F    P  R+
Sbjct:  176 MHGGLSPDLTDLDEIRNLPRPTDIPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGSDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPTDRK 306          
The following BLAST results are available for this feature:
BLAST of CN188639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP1G_CANFA6.205e-2944.53Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_BOVIN6.205e-2944.53Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP11_SCHPO8.104e-2944.27Serine/threonine-protein phosphatase PP1-1 OS=Schi... [more]
PP1_BRAOL1.058e-2845.80Serine/threonine-protein phosphatase PP1 OS=Brassi... [more]
PP11_ARATH1.058e-2843.85Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PPIG_XENTR1.805e-2843.80Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1GB_XENLA1.805e-2843.80Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1GA_XENLA1.805e-2843.80Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP12_SCHPO2.358e-2844.27Serine/threonine-protein phosphatase PP1-2 OS=Schi... [more]
PP12_TOBAC5.253e-2844.27Serine/threonine-protein phosphatase PP1 isozyme 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006H18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006H18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188639 ID=CN188639; Name=CN188639; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTCATCTTGAGCCAGCTCCCATCAGCATGCAACTGAAAGCTGCCC
CTTATCTGCTTTCTACCTCAAAATTCATAAAATTACAGGCCATGATATAA
CATGTTATTGCCGCCCACTTAGACAATATACAAGACAACAGGCCATTGAT
GCCTTCTGTCAGTACTCCTATGGACTCCTTCAGCACATCAACAAAGCAGT
AGTAGGGCAAAACTCGAAACAAAAGAATGATGTTGTAACCTCAACTTAAA
CAACAAAAGCTCCTCCTTTTTAAGGACACATCTACCTGGTAGGTAAACAA
ACATGAATTACAAACAGATGGTGGAAATATTGAAATTACAAAAAATAATC
AGGCGTCTTGCGCGTGGTGTCAGGCTCTATTTGCCGTGGTGCTGGATCAA
ATTGGAGAAAATTCTGCTCCATATTCTCCCCAATCTCTAAAATTGCAGCC
ATATTCCCACATCGGTAACAATAGTTAGGAGCACTAAATACAGTCACCAC
ATTCTTATCCTGACACCAATTGTATCCTTCCATGACAAGCTGGTGGGCTC
TTGAAATAAGACTGAGTCCGTTGGTGTGGTTGAACTGAGATGCTATATCC
TGCCCAAATGTATAGCCCGCACCACGGGGAGATATTCCCCACCCACAGCG
GTCATCTGGATCAGACCACAAGAGATCGCACATGGGTCCTTCATGTGGAA
CCTCCTGTATTCGGTCCAGGGCCCTAATGTTATCTAGTGTATCCAAAGAT
GGTGAAAGTCCTCCATGCAA
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