CN188635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E2_CAEEL (Eukaryotic translation initiation factor 4E-2 OS=Caenorhabditis elegans GN=ife-2 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.496e-19 Identity = 49/162 (30.25%), Postives = 91/162 (56.17%), Query Frame = -3 Query: 282 SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHL-------KLPHSYVMEYKPHDASLRDNSS 731 S+E+ +K + FS+V FW + + PS L P+D ++F++GI P+WE N NGG+W+I +K + W ++++A++G+Q D +++CG V ++R +SVW N++D A + + +K+ L + P V+ Y+ H++ + SS Sbjct: 35 SWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDYNVFRDGIEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCGIVCNVRGKGSKISVWTTNSADDGANLRIGGVLKQVLNNASMIHQRPLYDVLRYEDHESCQKKTSS 196
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E1_SCHPO (Eukaryotic translation initiation factor 4E-1 OS=Schizosaccharomyces pombe GN=tif451 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.848e-18 Identity = 53/166 (31.93%), Postives = 86/166 (51.81%), Query Frame = -3 Query: 270 TPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFK---KVVSGRFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNT 755 TPG+ + + K I+ F++VE FW + ++ S LP +D F+EG+RP WED N GGKW + K W VLA +G+ LD G + G V+++R L+VW ++ ++ + +M + K+ L LP S +E+ H+ S + S+ T Sbjct: 53 TPGLE----WNELQKNIITFNSVEEFWGIHNNINPASSLPIKSDYSFFREGVRPEWEDVHNKTGGKWAFQNKGRGGNALDEMWLTTVLAAIGETLDPTGQEVMGVVINMRKGFYRLAVWTKSCNNREVLMEIGTRFKQVLNLPRSETIEFSAHEDSSKSGSTRAKT 214
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E3_DANRE (Eukaryotic translation initiation factor 4E type 3 OS=Danio rerio GN=eif4e3 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 55/156 (35.26%), Postives = 79/156 (50.64%), Query Frame = -3 Query: 306 RRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQL-DY---GDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHD 761 R PG T E N+KKI TV+ FW Y ++ S LP HL + RPLWE+ +N GG W ++ K + W++L+LA +G+Q DY D + G +S+R ED++ VWN NAS L + ++ V YKPH+ Sbjct: 59 RSLPGT-TAAECESNLKKIYTVHTVQSFWSVYNNIPPVSCLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKESTLAVWKELLLATIGEQFTDYCASEDEVVGVSVSVREREDVVQVWNGNASFANEANVLGRIYELLPQISFKAVF-YKPHE 212
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E2_ARATH (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana GN=EIF4E2 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = -3 Query: 294 NIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKW---IIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIR--FNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLR 719 +++K F TVE FW + + + S L + ++HLFK G+ P WED NGGKW + +K + W + ++AL+G+Q D D ICG V S+R +D LS+W R S+ +M + K L + + + HD S R Sbjct: 49 SLRKAYTFDTVEDFWGLHETIFQTSKLTANAEIHLFKAGVEPKWEDPECANGGKWTWVVTANRKEALDKGWLETLMALIGEQFDEADEICGVVASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILDVTDK--ITFNNHDDSRR 193
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E1_CAEEL (Eukaryotic translation initiation factor 4E-1 OS=Caenorhabditis elegans GN=ife-1 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 51/162 (31.48%), Postives = 87/162 (53.70%), Query Frame = -3 Query: 282 SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQLDYG-DNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHL-------KLPHSYVMEYKPHDASLRDNSS 731 S+ED +KK+ F+TV FW Y + PS L + D ++F++ I+P+WE N NGG+W+I K + W ++++ALVG+Q ++ICG V ++R +SVW ++ +D + M + +K L P V+ Y+ H++ + SS Sbjct: 30 SWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRDDIQPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNVRGKGSKISVWTKDCNDDETNMRIGVVLKEKLMAASKDHSKPLFDVIRYEDHESCQKKTSS 191
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E_CANGA (Eukaryotic translation initiation factor 4E OS=Candida glabrata GN=TIF45 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 6.346e-18 Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = -3 Query: 300 PGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWI--IRFKKVVSGRFWEDLVLALVGDQLDYGDN-ICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDAS 752 P V S+ D ++ + F +VE FW ++ P LP +D H+F+ IRP WEDSAN GGKW +R + W +LA++G+ +D D+ I G VL++R + ++W ++ D + + + K+ LKL +E+ PH + Sbjct: 46 PAVDKSESWSDLLRPVTSFQSVEEFWAIVQNIPEPHELPLKSDYHVFRNDIRPEWEDSANAKGGKWSFQVRGRGAEIDELWLRTLLAVIGETIDEEDSQINGVVLNVRKGGNRFALWTKSC-DKEPLSNIGARFKQVLKLADEDTLEFFPHSTA 198
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E3_MOUSE (Eukaryotic translation initiation factor 4E type 3 OS=Mus musculus GN=Eif4e3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18 Identity = 56/158 (35.44%), Postives = 78/158 (49.37%), Query Frame = -3 Query: 306 RRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLD----YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPH--SYVMEYKPHD 761 R PG T N+KKI TV+ FW Y ++ + LP HL + RPLWE+ +N GG W ++ K + W++L+LA +G+Q D I G +S+R ED++ VWN NAS L K H LPH + YKPH+ Sbjct: 42 RSLPGA-TAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEIIGVSVSVRDREDVVQVWNVNASLVGEATVLE---KIHQLLPHIAFKAVFYKPHE 195
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: I4E3B_XENLA (Eukaryotic translation initiation factor 4E type 3-B OS=Xenopus laevis GN=eif4e3-B PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18 Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = -3 Query: 306 RRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQL----DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHD 761 R PG T E N+KKI T++ FW Y ++ S LP HL + +PLWE+ +N GG W ++ K S W++L+LA +G+Q D + G +S+R ED++ VWN NAS L + I L + YKPH+ Sbjct: 53 RSLPGT-TAAECESNLKKIYTVHTIQSFWSVYNNIPLVSNLPLRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEASSLVWKELLLATIGEQFTDHCSPEDEVIGVSVSVRDREDVVQVWNGNASVVGEAKVL-EKIYELLPNTSFKAVFYKPHE 206
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: IF4E3_XENTR (Eukaryotic translation initiation factor 4E type 3 OS=Xenopus tropicalis GN=eif4e3 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.082e-17 Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = -3 Query: 306 RRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLD----YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHD 761 R PG T E N+KKI T++ FW Y ++ + + LP HL + +PLWE+ +N GG W ++ K S W++L+LA +G+Q D + G +S+R ED++ VWN NAS L + I L + YKPH+ Sbjct: 53 RSLPGT-TAAECESNLKKIYTVHTIQSFWSVYNNIPQVTNLPLRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEASSLVWKELLLATIGEQFTDRCAPEDEVIGVSVSVRDREDVVQVWNGNASVVGEATVL-EKIYELLPNTSFKAVFYKPHE 206
BLAST of CN188635 vs. ExPASy Swiss-Prot
Match: I4E3A_XENLA (Eukaryotic translation initiation factor 4E type 3-A OS=Xenopus laevis GN=eif4e3-A PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.414e-17 Identity = 53/156 (33.97%), Postives = 78/156 (50.00%), Query Frame = -3 Query: 306 RRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLD----YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHD 761 R PG T E N+KKI T++ FW Y ++ + LP HL + +PLWE+ +N GG W ++ K S W++L+LA +G+Q D + G +S+R EDI+ VWN NAS A + + I L + YKPH+ Sbjct: 53 RSLPGT-TAAECESNLKKIYTVHTIQSFWSVYNNIPLVTNLPVRWSYHLMRGERKPLWEEESNAKGGVWKMKVPKEASSLVWKELLLATIGEQFTDRCAPEDEVIGVSVSVRDREDIVQVWNGNAS-VVAEATVLEKIYELLPNTSFKAVFYKPHE 206 The following BLAST results are available for this feature:
BLAST of CN188635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188635 ID=CN188635; Name=CN188635; organism=Citrus sinensis; type=EST; length=766bpback to top |