CN188627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_HUMAN (Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_HORSE (Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188627 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = -3 Query: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 342 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3 Query: 343 AKIQDKEGIPPDQQRFIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 489 AKIQDKEGIPPDQQR IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 The following BLAST results are available for this feature:
BLAST of CN188627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188627 ID=CN188627; Name=CN188627; organism=Citrus sinensis; type=EST; length=491bpback to top |