CN188623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_DANRE (60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.102e-42 Identity = 93/186 (50.00%), Postives = 118/186 (63.44%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG---IRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFSYGL++Q VY+NGSVYSPEVLD++ED L ++F GV + ++ L I PTLA PH IN YK V+AV + T+Y+FP A+KVK YLADP+ F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_CHERU (60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.102e-42 Identity = 88/106 (83.02%), Postives = 100/106 (94.34%), Query Frame = -1 Query: 385 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPH 702 QTSFFQVLNIP KINKGTVEIIT VELI+KG+KVGSSEAALLAKLGIRPFSYGL V+SVY++GSV+SPEVLDL+EDDL+ +FA+GVSMVT+L+LAIS PTLA APH Sbjct: 137 QTSFFQVLNIPTKINKGTVEIITAVELIKKGEKVGSSEAALLAKLGIRPFSYGLNVESVYDDGSVFSPEVLDLTEDDLLARFATGVSMVTSLSLAISYPTLAAAPH 242
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.031e-40 Identity = 88/184 (47.83%), Postives = 118/184 (64.13%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F GV V ++ L I PT+A PH IN YK V+A+++ T+Y+FP A+KVK +LADPS F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40 Identity = 88/185 (47.57%), Postives = 118/185 (63.78%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F GV V ++ L I PT+A PH IN YK V+A+++ T+Y+FP A+KVK +LADPS F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAAPAAAPAATTAAPAKVEAKEESEESDEDMGFGLFD 318
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40 Identity = 88/184 (47.83%), Postives = 117/184 (63.59%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+YSPEVLD++E L +F GV V ++ L I PT+A PH IN YK V+A+++ T+Y+FP A+KVK +LADPS F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFAAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40 Identity = 87/185 (47.03%), Postives = 118/185 (63.78%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+Y+PEVLD++E+ L +F GV V ++ L I PT+A PH IN YK V+A+++ T+Y+FP A+KVK +LADPS F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAAPAKVEAKEESEESDEDMGFGLFD 318
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.001e-40 Identity = 85/184 (46.20%), Postives = 114/184 (61.96%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L+IP KI+KGT+EII V +++ GDKVG+SEA LL L I PFSYGL+V VY++GS++SPE+LD+ +DL KF GV+ + A+ L++ PT+A APH N +KN++A+A TE F +A +KEY+ DPSKF E D DMGF LFD Sbjct: 134 KTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 3.920e-40 Identity = 87/184 (47.28%), Postives = 116/184 (63.04%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+Y+PEVLD++E L +F GV V ++ L I PT+A PH IN YK V+A+++ TEY+FP +KVK +LADPS F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPSAFAAAAPAAAATTAAPAAAAAPAKAEAKEESEESDEDMGFGLFD 317
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.140e-39 Identity = 85/184 (46.20%), Postives = 115/184 (62.50%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L+IP KI+KGT+EII V +++ GDKVG+SEA LL L I PFSYGL + VY++GS++SPE+LD+ +DL KF +GV+ + A++L I PT+A APH N +KN++A+A +TE F QA +KE++ DPSKF E D DMGF LFD Sbjct: 134 KTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKFVAAAAASAPAAGAGAAAEKKEEAKKEESESEEDDDMGFGLFD 317
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.334e-39 Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD +E+ L +F GV V ++ L PT+A PH IN YK V+A+++ T+Y+FP A+ VK +LADPS F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAFVAAAPVAADTTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317 The following BLAST results are available for this feature:
BLAST of CN188623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188623 ID=CN188623; Name=CN188623; organism=Citrus sinensis; type=EST; length=702bpback to top |