CN188623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_CAEEL (60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0 PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 5.660e-39 Identity = 84/183 (45.90%), Postives = 119/183 (65.03%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L IP KI +GT+EI+ V LI++GDKVG+SE+ALL LG+ PFSYGLVV+ VY++G++Y+PEVLD++ ++L ++F SGV V +++LA++ PTLA H N +N++ VA T+ SF +A+ +K ++ADPSKF ESD DMGF LFD Sbjct: 134 KTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF----AAAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 312
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.056e-37 Identity = 83/183 (45.36%), Postives = 112/183 (61.20%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L IP KI +GT+EI + V L+ K KVG SEA LL L I PF+YG+ V ++Y+ G+V+SPE+LD+SE+DL+ S S++TA++L + PT+ H +NAYKN+VAV+LATEY+F ++ K +LADPS F ESD DMGF LFD Sbjct: 132 KTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAF--VVAAAPAAAAGGEAEAPAAEAAAEEEEESDEDMGFGLFD 312
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34 Identity = 76/182 (41.76%), Postives = 109/182 (59.89%), Query Frame = -1 Query: 154 TSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 699 T FFQ L I KI KG +EI V+LIR+G++V +S A LL KL ++PF+YGL V+ VY+NGSVYS VLD++++ ++E FA+G + V A++ A+ P+ A APH + A++N A+ L T + FPQ ++KE + +P+ F E DGDMGFSLFD Sbjct: 134 TGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGLKVEHVYDNGSVYSASVLDITDEQILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVENPAAF-AAAAAPAAAAPAAAPAAAAKAPEPEEEEEEDGDMGFSLFD 314
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32 Identity = 72/183 (39.34%), Postives = 109/183 (59.56%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L +P KI +GT+EI++ V+++ G+KVG SEA+LL L I PF++GL V VY+NG V+ +LD+++++LV F S VS + +++LAI PTL H IN YK+++AVA+A Y +P+ + + + + +P K+ ESD DMGF LFD Sbjct: 132 KTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRIENPEKY--AAAAPAATSAASGDAAPAEEAAAEEEEESDDDMGFGLFD 312
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31 Identity = 62/142 (43.66%), Postives = 101/142 (71.13%), Query Frame = -1 Query: 277 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 702 +TSFFQ L +P KI +GT+EI T ++L+ G KVG SEA LL L I PF+YG+ + VY+ G+ + +VLD+SE+ L++ F++ ++ + +L+LA++ PTL H +NAYK V+AVA+ TE S+P+ +++K+ +A+P + Sbjct: 132 KTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSDVLDISEEQLLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIANPEAY 273
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31 Identity = 62/142 (43.66%), Postives = 100/142 (70.42%), Query Frame = -1 Query: 277 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 702 +TSFFQ L +P KI +GT+EI T ++L+ G KVG SEA LL L I PF+YG+ + VY+ G+ + VLD+SE+ L++ F+S ++ + A++LA++ PTL H +N+YK V+AVA+ TE S+P+ +++K+ +A+P + Sbjct: 132 KTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSSVLDISEEQLLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIANPEAY 273
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29 Identity = 63/137 (45.99%), Postives = 92/137 (67.15%), Query Frame = -1 Query: 292 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLA 702 QTSF Q L I KIN+G ++I+ V +I+ G KVG+SEA LL KL I+PF+YGL + +Y+ G+ YSP + SE+DL+ KF G+ + A++L I PT+A PH +NA+KN++A++ T Y+F A+K K A Sbjct: 133 QTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFKSAAA 266
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.495e-28 Identity = 69/182 (37.91%), Postives = 106/182 (58.24%), Query Frame = -1 Query: 154 TSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 699 TSF + L I KI KG +EI V LI++G+KV +S A LL K + P SYG+ V++VY++G +Y +VLD++++D++EKF+ GVS V AL+ A T A PH+F+ A+KN+VA+ + ++Y+FP +K+++ +P F E DG MGF +FD Sbjct: 136 TSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 61/130 (46.92%), Postives = 87/130 (66.92%), Query Frame = -1 Query: 313 TSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKF-ASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQAD 699 TSFFQ LNI KI KGTVEI++ +++ GD+V +S A LL KL I PF Y + VQSV++ G ++ E L ++ DD+VEK+ G+S V AL+L PT A PHM ++A+K ++ ++ATEY F + D Sbjct: 142 TSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSIT-DDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_LEIIN (60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22 Identity = 57/128 (44.53%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 319 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQ 702 QTSFFQ LNI KI KG VEI+T +++ GDKV +S A LL KL I PF Y + V SV++ G +++ E L ++ED + + G+S V A+AL PT + M ++A+KN++AV++AT Y F + Sbjct: 141 QTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFEE 268 The following BLAST results are available for this feature:
BLAST of CN188623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188623 ID=CN188623; Name=CN188623; organism=Citrus sinensis; type=EST; length=702bpback to top |