CN181564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_HYPBU (Translation initiation factor 5A OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eIF5A PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.463e-11 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ YIVI G PC++VE+S +KTGKHG AK H+V + +F+G K P +VP + + Q+I D V ++ ++ P DE+L S+++ G E Sbjct: 11 LKVGSYIVIDGEPCRIVEMSKAKTGKHGSAKAHVVAVCLFSGNKKTLTAPVDARVEVPIIDKRIGQVIADMGD-MVQIMDMETYETFEVEKPKDEDLKSKLQPGVE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_SULIL (Translation initiation factor 5A OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.911e-11 Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ Y+VI G PC+VVEV+ +KTGKHG AK ++V I +F+G K + P +VP + + Q+I +D + E T ++ PT++ L S+I+ E Sbjct: 11 LKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMDDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_CALMQ (Translation initiation factor 5A OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.259e-11 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = -1 Query: 348 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISED 566 I++ YI+I PC+VVEV SKTGKHG AK +VGI + +G K +VP+ +VP + + Q+I IS D Sbjct: 11 IKEGSYIMIDNMPCRVVEVEKSKTGKHGSAKARIVGIGVIDGVKRTIVVPTDAAVEVPVIEKFTAQVISISGD 83
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_KORCO (Translation initiation factor 5A OS=Korarchaeum cryptofilum (strain OPF8) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.256e-11 Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 +RK Y+++ PC+V+EVS SK GKHG AK + IF+G + I P+ ++P V + Q+I++ V L+ +L LP D L S++K G E Sbjct: 11 LRKGSYVILDDEPCEVLEVSKSKPGKHGSAKVRVEARGIFDGARRSKIFPADALVEIPIVDKKTAQVINV-YGNVVQLMDLETYETFELPLPEDPELASRLKSGIE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_THEAC (Translation initiation factor 5A OS=Thermoplasma acidophilum GN=eif5a PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = -1 Query: 249 YIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 551 YI+I PCK+VE++ SK GKHG AK +V I +F+ +K + P H +P + + + Q++ + ++ V L+ + T + LP D + +IK G E Sbjct: 16 YILIDDAPCKIVEITMSKPGKHGEAKGRIVAIGVFDNQKRSVVYPVKHKVKIPIIEKKNAQVLSV-QNNEVQLM--DSETFETFVLPLDPEIADKIKPGME 113
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_SULIY (Translation initiation factor 5A OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ Y+VI G PC+VVEV+ +KTGKHG AK ++V I +F+G K + P +VP + + Q+I D + E T ++ PT++ L S+I+ E Sbjct: 11 LKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_SULIN (Translation initiation factor 5A OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ Y+VI G PC+VVEV+ +KTGKHG AK ++V I +F+G K + P +VP + + Q+I D + E T ++ PT++ L S+I+ E Sbjct: 11 LKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_SULIM (Translation initiation factor 5A OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ Y+VI G PC+VVEV+ +KTGKHG AK ++V I +F+G K + P +VP + + Q+I D + E T ++ PT++ L S+I+ E Sbjct: 11 LKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_SULIK (Translation initiation factor 5A OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ Y+VI G PC+VVEV+ +KTGKHG AK ++V I +F+G K + P +VP + + Q+I D + E T ++ PT++ L S+I+ E Sbjct: 11 LKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_SULIA (Translation initiation factor 5A OS=Sulfolobus islandicus (strain M.16.27) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ Y+VI G PC+VVEV+ +KTGKHG AK ++V I +F+G K + P +VP + + Q+I D + E T ++ PT++ L S+I+ E Sbjct: 11 LKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115 The following BLAST results are available for this feature:
BLAST of CN181564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181564 ID=CN181564; Name=CN181564; organism=Citrus sinensis; type=EST; length=566bpback to top |