CN181561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF1_RHIME (NADH-quinone oxidoreductase subunit F 1 OS=Rhizobium meliloti GN=nuoF1 PE=3 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 9.200e-94 Identity = 156/217 (71.89%), Postives = 184/217 (84.79%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 655 GCPTTV NVE++AV+PTILRRG W+ FGR NN GTKL+ VSGHVN+PCTVE+ MSIP ELI++HCGG+RGGWDNLLAVIPGGSSVP +P D +MDYD L+ + SGLGTAAVIVMDKSTD++ AI RLS FYKHESCG+CTPCREGTGW+ +MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI E+ Sbjct: 203 GCPTTVNNVESIAVTPTILRRGAGWYTSFGRPNNHGTKLYSVSGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKDAIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMRVMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEKRIDEY 419
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICBR (NADH-quinone oxidoreductase subunit F OS=Rickettsia bellii (strain RML369-C) GN=nuoF PE=3 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.569e-93 Identity = 154/215 (71.63%), Postives = 181/215 (84.19%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 649 GCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK+FC+SGHVNKPC VEE M IPLKE+I++H GGVRGGWDNL A+IPGGSSVPLLPK +C+ MD+D+LKA S LGT +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL G+AK EID L EVTK+IEGHTICALGDAAAWP+QGLI+HFR E+E RI+ Sbjct: 203 GCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTKIFCISGHVNKPCNVEEAMGIPLKEIIEKHAGGVRGGWDNLKAIIPGGSSVPLLPKSLCETADMDFDSLKAAGSSLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGDAKKSEIDQLLEVTKEIEGHTICALGDAAAWPIQGLIKHFRNEIESRIQ 417
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICB8 (NADH-quinone oxidoreductase subunit F OS=Rickettsia bellii (strain OSU 85-389) GN=nuoF PE=3 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.569e-93 Identity = 154/215 (71.63%), Postives = 181/215 (84.19%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 649 GCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK+FC+SGHVNKPC VEE M IPLKE+I++H GGVRGGWDNL A+IPGGSSVPLLPK +C+ MD+D+LKA S LGT +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL G+AK EID L EVTK+IEGHTICALGDAAAWP+QGLI+HFR E+E RI+ Sbjct: 203 GCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTKIFCISGHVNKPCNVEEAMGIPLKEIIEKHAGGVRGGWDNLKAIIPGGSSVPLLPKSLCETADMDFDSLKAAGSSLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGDAKKSEIDQLLEVTKEIEGHTICALGDAAAWPIQGLIKHFRNEIESRIQ 417
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICM5 (NADH-quinone oxidoreductase subunit F OS=Rickettsia massiliae (strain Mtu5) GN=nuoF PE=3 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 7.789e-93 Identity = 156/218 (71.56%), Postives = 183/218 (83.94%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTT+ NVE++AV PTILRRG WFAG G+ NN+GTK+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C+ V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++ Sbjct: 203 GCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKLLCE-VEMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICPR (NADH-quinone oxidoreductase subunit F OS=Rickettsia prowazekii GN=nuoF PE=3 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 2.960e-92 Identity = 153/215 (71.16%), Postives = 183/215 (85.12%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 649 GCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK+FC+SGHVNKPC +EE M +PLKELI+++ GGVRGGW+NL A+IPGG+SVPLLPK +C+ V MD+D+L+ V SGLGT +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E+RIK Sbjct: 203 GCPTTINNVESIAVVPTILRRGASWFAAIGKPNNTGTKVFCISGHVNKPCNIEEVMGVPLKELIEKYAGGVRGGWNNLKAIIPGGASVPLLPKSLCE-VEMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVNGNAKKNEIDTLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEIEQRIK 416
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICTY (NADH-quinone oxidoreductase subunit F OS=Rickettsia typhi GN=nuoF PE=3 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 3.865e-92 Identity = 153/215 (71.16%), Postives = 182/215 (84.65%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 649 GCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK+FC+SGHVNKPC +EE M IPLKELI+++ GGVRGGWDNL A+IPGG+SVPLLPK +C+ V MD+D+L+ V SGLGT +IVMD+STD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNAK EI+ L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK Sbjct: 203 GCPTTINNVESIAVVPTILRRGASWFAAIGKPNNTGTKIFCISGHVNKPCNIEEAMGIPLKELIEKYAGGVRGGWDNLKAIIPGGASVPLLPKSLCE-VEMDFDSLRTVGSGLGTGGIIVMDRSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVNGNAKKTEIETLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEIEERIK 416
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICCN (NADH-quinone oxidoreductase subunit F OS=Rickettsia conorii GN=nuoF PE=3 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.125e-91 Identity = 154/215 (71.63%), Postives = 180/215 (83.72%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 649 GCPTT+ NVE++AV PTILRRG WFAG G+ NN+GTK+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C+ V MD+D+L+ SGLGT +IVMD+STD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GN K EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK Sbjct: 203 GCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLCE-VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGNVKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIK 416
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICFE (NADH-quinone oxidoreductase subunit F OS=Rickettsia felis GN=nuoF PE=3 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.469e-91 Identity = 154/215 (71.63%), Postives = 180/215 (83.72%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 649 GCPTT+ NVE++AV PTILRRG WFA G+ NN+GTK+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C+ V MD+D+L+ SGLGT +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNA+ EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK Sbjct: 203 GCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLCE-VDMDFDSLRTAGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGNAQKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEERIK 416
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICAH (NADH-quinone oxidoreductase subunit F OS=Rickettsia akari (strain Hartford) GN=nuoF PE=3 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.469e-91 Identity = 155/218 (71.10%), Postives = 182/218 (83.49%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTT+ NVE++AV PTILRR WFA G+ NN+GTK+FC+SGHVNKPC VEE M I LKELI+++ GGVRGGWDNL A+IPGGSSVPLLPK +C+ V MD+D+L+ V SGLGT +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++ Sbjct: 203 GCPTTINNVESIAVVPTILRRRASWFASIGKPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLCE-VDMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMIRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEDRIKSYS 419
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_RICCK (NADH-quinone oxidoreductase subunit F OS=Rickettsia canadensis (strain McKiel) GN=nuoF PE=3 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 1.918e-91 Identity = 152/214 (71.03%), Postives = 180/214 (84.11%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 646 GCPTT+ NVE++AV PTILRRG +WFA G+ NN+GTK+FC+SGHVNKPC VEE M IPLKELI+++ GGV+GGW+NL A+IPGGSSVPL+PK IC+ V MD+D+L+ SGLGT +IVM++STD+V AIARLS FY HESCG+CTPCREGTGW+W +M RL GNAK EID L VTK IEGHTICALGDAAAWP+QGLIRHFR E+E RI Sbjct: 203 GCPTTINNVESIAVVPTILRRGANWFASIGKPNNTGTKVFCISGHVNKPCNVEEVMGIPLKELIEKYAGGVQGGWNNLKAIIPGGSSVPLIPKSICETVDMDFDSLRTAGSGLGTGGIIVMNQSTDIVYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGNAKKSEIDQLLSVTKAIEGHTICALGDAAAWPIQGLIRHFRDEIEERI 416 The following BLAST results are available for this feature:
BLAST of CN181561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181561 ID=CN181561; Name=CN181561; organism=Citrus sinensis; type=EST; length=658bpback to top |