CN181561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_ECOLI (NADH-quinone oxidoreductase subunit F OS=Escherichia coli (strain K12) GN=nuoF PE=1 SV=3) HSP 1 Score: 130.954 bits (328), Expect = 5.495e-30 Identity = 74/218 (33.94%), Postives = 116/218 (53.21%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK-HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELERRIKE 652 G PT V NVET+ P IL G +W+ + ++GTKL SG V P E +E+++ + GG+R G A PGG+ L + H+ D+ M+++++ S LGTA + +D ++V + L F+ ESCG CTPCR+G W I+ L+ G + +I+ L+++ + + G T CA A P+Q I++FR E E IK+ Sbjct: 211 GKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHL--DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_SALTY (NADH-quinone oxidoreductase subunit F OS=Salmonella typhimurium GN=nuoF PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 9.373e-30 Identity = 74/218 (33.94%), Postives = 115/218 (52.75%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPK-HICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELERRIKE 652 G PT V NVET+ P IL G +W+ + ++GTKL SG V P E +E+++ + GG+R G A PGG+ L + H+ D+ M+++++ S LGTA + +D +V + L F+ ESCG CTPCR+G W I+ L+ G + +I+ L+++ + + G T CA A P+Q I++FR E E IK+ Sbjct: 211 GKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHL--DLPMEFESIGKAGSRLGTALAMAVDHEIGMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_BUCAI (NADH-quinone oxidoreductase subunit F OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=nuoF PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.652e-29 Identity = 71/216 (32.87%), Postives = 115/216 (53.24%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP-LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE-GHTICALGDAAAWPVQGLIRHFRPELERRI 646 G PT V NVET++ P I+ G W+ + +++GTKL SG+V P E +E+++ + G++ G+ +L A PGG+ LL +H+ D+ MD+ + S LGTA + +D T +V + + F+ ESCG CTPCR+G W+ I++ L+ ++ L+++ + G T CA A P+Q I++FR E E I Sbjct: 213 GKPTCVNNVETLSNVPCIILNGVSWYKNLSKSSDTGTKLMGFSGNVRNPGVWELPFGTTAREILEDYAHGMKSGF-SLKAWQPGGAGTDFLLEEHL--DLPMDFKNISQAGSRLGTALSMAVDNKTSMVSLVYNIEKFFSRESCGLCTPCRDGLPWIVKILKSLEQNKGHKNDVKNLEKLCSHLSPGKTFCAHAPGAIEPLQSAIKYFRSEFESGI 425
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_BUCAP (NADH-quinone oxidoreductase subunit F OS=Buchnera aphidicola subsp. Schizaphis graminum GN=nuoF PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.717e-28 Identity = 72/217 (33.18%), Postives = 115/217 (53.00%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNS-GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP-LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE-GHTICALGDAAAWPVQGLIRHFRPELERRI 646 G PT V NVET++ P+I+ G +W+ + ++ GTKL SG VN P E +E+++ + G++ G L + PGG+ L+ KH+ D+ MD+ ++ S LGTA + +D T+++ + + F+ ESCG CTPCREG W+ I+E L+ ++ L+ + + G T CA A P+Q I++FR E E I Sbjct: 211 GKPTCVNNVETLSNVPSIVLHGVNWYKKLSKSTDTTGTKLMGFSGKVNNPGVWELPFGTTAREILEDYARGMKSGLF-LKSWQPGGAGTDFLIEKHL--DLPMDFTSIAKAGSRLGTAIAMAVDNKTNMISLVCNIEKFFSRESCGLCTPCREGLPWIVKILESLEKKEGHKNDVKNLERLCLDLSPGKTFCAHAPGAVEPLQSAIKYFRLEFEAGI 424
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_PSEAE (NADH-quinone oxidoreductase subunit F OS=Pseudomonas aeruginosa GN=nuoF PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNS--GTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVP-LLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELERRI 646 G PT V NVET+ P I+ G DW+ R + GTKL SG V P E + +EL + + GG+R G+ L A PGG+ LLP+H+ D M + V + +GT + +D S ++V + + F+ ESCG CTPCR+G W ++ L+ G + +++ L+++ + G T CA A P+ +++FR E E I Sbjct: 219 GKPTCVNNVETLCNVPAIVGNGVDWYKTLARPGSEDMGTKLMGFSGKVKNPGLWELPFGVSARELFEDYAGGMRDGFQ-LKAWQPGGAGTGFLLPEHL--DAQMFAGGIAKVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGLPWSVKLLRALERGEGQPGDLETLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEAGI 433
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NUOF_AQUAE (NADH-quinone oxidoreductase subunit F OS=Aquifex aeolicus GN=nuoF PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.075e-25 Identity = 77/222 (34.68%), Postives = 115/222 (51.80%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGG----SSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 G PT V NVET+A P I+ G + + G + +G KLF VSG V KP E M+ L+E+I ++ GG G + AV G SS L D+ MDY L GT VIV+ + D+V+A +++ FY+HE+CG+CTPCR G ++E++ G A ++ + V + I+ +IC LG A ++ + F E E+ K+ A Sbjct: 213 GKPTVVNNVETIANVPFIISMGWEEYRYIGPSDYAGPKLFPVSGKVKKPGVYELPMNTTLREVIFKYAGGTLGN-KKVKAVFSGALDCFSSEEL-------DIPMDYSPLGFG----GTGTVIVLTEEDDIVEAALKIAEFYEHETCGQCTPCRVGCYEQANLLEKIYKGEATEQDWEGFDFVNRNIQPTSICGLGAVAGRLIRQTLEKFPEEWEKYRKKSA 422
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: HOXF_RALEH (NAD-reducing hydrogenase hoxS subunit alpha OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hoxF PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.516e-16 Identity = 58/217 (26.73%), Postives = 93/217 (42.86%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 655 G PT+V NVET A I+ G DWF G +++GT+L V+G +KP E E + L E++ + G D I G P C V D + A + A + + D+++ + F+ ESCG C PCR G L +E + G A +++D + + + C LG + P+ + F + ++ H Sbjct: 369 GKPTSVNNVETFAAVSRIMEEGADWFRAMGTPDSAGTRLLSVAGDCSKPGIYEVEWGVTLNEVL-----AMVGARDARAVQISG-------PSGECVSVAKDGERKLAYEDLSCNGAFTIFNCKRDLLEIVRDHMQFFVEESCGICVPCRAGNVDLHRKVEWVIAGKACQKDLDDMVSWGALVRRTSRCGLGATSPKPILTTLEKFPEIYQNKLVRH 573 The following BLAST results are available for this feature:
BLAST of CN181561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181561 ID=CN181561; Name=CN181561; organism=Citrus sinensis; type=EST; length=658bpback to top |