CN181560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NDUV1_GORGO (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-37 Identity = 71/103 (68.93%), Postives = 84/103 (81.55%), Query Frame = -3 Query: 326 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 634 VIVMD+STD+V AIARL FYKHESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A++ Sbjct: 354 VIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQ 456
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NDUV1_MOUSE (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus GN=Ndufv1 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.266e-36 Identity = 71/103 (68.93%), Postives = 84/103 (81.55%), Query Frame = -3 Query: 326 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 634 VIVMD+STD+V AIARL FYKHESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A++ Sbjct: 354 VIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDRMQRFAQQ 456
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NDUV1_MACFA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Macaca fascicularis GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 70/103 (67.96%), Postives = 84/103 (81.55%), Query Frame = -3 Query: 326 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAER 634 VIVMD+STD+V AIARL FYK+ESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A++ Sbjct: 354 VIVMDRSTDIVKAIARLIEFYKYESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQ 456
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_MYCTU (NADH-quinone oxidoreductase subunit F OS=Mycobacterium tuberculosis GN=nuoF PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.955e-22 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 359 VMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 628 + D++T VV A+ R + FYKHESCG+CTPCREGT WL I ERL+ G E+ID L +++ I G + CALGD AA PV I+HFR E Sbjct: 330 IFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDE 419
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_MYCBO (NADH-quinone oxidoreductase subunit F OS=Mycobacterium bovis GN=nuoF PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.955e-22 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 359 VMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 628 + D++T VV A+ R + FYKHESCG+CTPCREGT WL I ERL+ G E+ID L +++ I G + CALGD AA PV I+HFR E Sbjct: 330 IFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDE 419
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_STRCO (NADH-quinone oxidoreductase subunit F OS=Streptomyces coelicolor GN=nuoF PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 344 DKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 622 D++T VV A+ R + FY HESCG+CTPCREGT WL ++ ++ G ++ ++D L ++ I G + CALGD AA P+ +++FR E E I Sbjct: 334 DETTCVVRAVTRWTEFYAHESCGKCTPCREGTYWLVQLLRDIEAGKGQMSDLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEEHI 426
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF2_RHIME (NADH-quinone oxidoreductase subunit F 2 OS=Rhizobium meliloti GN=nuoF2 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.981e-19 Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = -3 Query: 338 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 634 V+V+D ST +V R+ F+ HESCG+CTPCREG W ++ R++ G + +++ L+ + K I G+T CALGD AA ++ ++HFR E I+E Sbjct: 317 VVVIDDSTCMVKLATRIIEFFHHESCGKCTPCREGLDWTVKVLRRIEAGEGETGDLEQLEMLCKGIFGNTFCALGDGAAMGLRAALKHFRAEFVAHIEE 415
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NQO1_THET8 (NADH-quinone oxidoreductase subunit 1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 38/93 (40.86%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 359 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREG-TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 634 VI++ + +VDA+ L+ FY HESCG+CTPCREG G++ + ++ G + ++++ L+ + IEG + C L DAA WPV+G +RHF+ + Sbjct: 328 VILIPERVSMVDAMWNLTRFYAHESCGKCTPCREGVAGFMVNLFAKIGTGQGEEKDVENLEALLPLIEGRSFCPLADAAVWPVKGSLRHFKDQ 420
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_ECOLI (NADH-quinone oxidoreductase subunit F OS=Escherichia coli (strain K12) GN=nuoF PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.410e-11 Identity = 34/99 (34.34%), Postives = 55/99 (55.56%), Query Frame = -3 Query: 338 IVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELERRIKE 631 + +D ++V + L F+ ESCG CTPCR+G W I+ L+ G + +I+ L+++ + + G T CA A P+Q I++FR E E IK+ Sbjct: 327 MAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_SALTY (NADH-quinone oxidoreductase subunit F OS=Salmonella typhimurium GN=nuoF PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 34/99 (34.34%), Postives = 54/99 (54.55%), Query Frame = -3 Query: 338 IVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELERRIKE 631 + +D +V + L F+ ESCG CTPCR+G W I+ L+ G + +I+ L+++ + + G T CA A P+Q I++FR E E IK+ Sbjct: 327 MAVDHEIGMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 The following BLAST results are available for this feature:
BLAST of CN181560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181560 ID=CN181560; Name=CN181560; organism=Citrus sinensis; type=EST; length=636bpback to top |