CN181559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FLPA_HALWD (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Haloquadratum walsbyi (strain DSM 16790) GN=flpA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21 Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 70 GEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGM-VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQ 597 G VY E R + DG +R+W+ RSKL A ++ + G +LYLGAASGTTVSHV+D GP YA+EF+ R RDL+ +A R N+IP++ DAR P Y +V ++ + DVA QA + AL FL G ++ IKA D E VF + + L++ Sbjct: 26 GTTVYGEPR----DTDG----WRLWDAGRSKLGAMFKLDIET-GLTGGESILYLGAASGTTVSHVADFAGPT---YAIEFAPRPVRDLLEVATTRPNLIPLLCDARQPETYAHVVETDIEYLIQDVATRGQATV-ALRNRQFLAPDGKLILMIKARSEDVLSDPEDVFDTIISTLRE 189
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FLPA_HALSA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Halobacterium salinarium GN=flpA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21 Identity = 75/189 (39.68%), Postives = 100/189 (52.91%), Query Frame = 1 Query: 31 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQ 594 G ED ++ GE Y E + DG +R W+ RSKL A G+D + G VLYLGAA+GTTVSHV+D GP YAVEF+ R DL+ +A R + P+++DAR P Y +V VD I DVA QA + AL+ FL G V ++KA D T AVF+ + +L+ Sbjct: 13 GDEDGVLATR---GEPAYGEPVV-----DG----WRRWDAHRSKLGATFELGLDT-GLSGGDAVLYLGAANGTTVSHVADFAGP---TYAVEFAPRPVTDLLAVADSRERLFPLLKDARAPETYAHVVESGVDAIVQDVATRGQADV-ALSNRQFLADDGRLVAALKARSEDVTADPAAVFEDLLGRLR 184
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FLPA_HALS3 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=flpA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21 Identity = 75/189 (39.68%), Postives = 100/189 (52.91%), Query Frame = 1 Query: 31 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQ 594 G ED ++ GE Y E + DG +R W+ RSKL A G+D + G VLYLGAA+GTTVSHV+D GP YAVEF+ R DL+ +A R + P+++DAR P Y +V VD I DVA QA + AL+ FL G V ++KA D T AVF+ + +L+ Sbjct: 13 GDEDGVLATR---GEPAYGEPVV-----DG----WRRWDAHRSKLGATFELGLDT-GLSGGDAVLYLGAANGTTVSHVADFAGP---TYAVEFAPRPVTDLLAVADSRERLFPLLKDARAPETYAHVVESGVDAIVQDVATRGQADV-ALSNRQFLADDGRLVAALKARSEDVTADPAAVFEDLLGRLR 184 The following BLAST results are available for this feature:
BLAST of CN181559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181559 ID=CN181559; Name=CN181559; organism=Citrus sinensis; type=EST; length=626bpback to top |