CN181555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_ASHGO (RuvB-like helicase 1 OS=Ashbya gossypii GN=RVB1 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.363e-28 Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 2 Query: 95 RIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 R AH+HI+GLGLD A+ V G VGQ+ AR+A GVI+ +IK +++GRA+L+AG P TGKTA+A+ + + LG + PF + SE+FS+E+ KTE LM+ FR+AIG+RI K + + P T L + E++ +EKV GDVI I+ SG Sbjct: 19 RTAAHTHIKGLGLDEFGAAKQVEGGFVGQVEAREACGVIVDLIKAKRMSGRAILLAGGPSTGKTALALAITQELGPKVPFCPLVGSELFSVEVKKTETLMENFRRAIGLRIKEVKEVYEGEVTELTPEEAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSVGDVIYIESNSG 203
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_CANAL (RuvB-like helicase 1 OS=Candida albicans GN=RVB1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.125e-27 Identity = 62/129 (48.06%), Postives = 92/129 (71.32%), Query Frame = 2 Query: 44 RMAELKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIK 430 ++ E+K ++S +R R AH+HI+GLGL+ A+ + G VGQ AR+A G+I+ +IK K++G+AVLIAG P TGKTA+A+ +++ LG + PF I SE++S E+ KT ALM+ FR+AIG+RIK Sbjct: 3 QITEVKENQS---SRESRTAAHTHIKGLGLNEQGIAKPIEGGFVGQNEAREACGIIVDLIKSKKMSGKAVLIAGPPATGKTALALAISQELGPKVPFCPIVGSELYSAEVKKTSALMENFRRAIGLRIK 128
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_GIBZE (RuvB-like helicase 1 OS=Gibberella zeae GN=RVB1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.387e-27 Identity = 73/198 (36.87%), Postives = 110/198 (55.56%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATS-XXXXXXXXXXXXXXEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +++SE + R R AH+HI+GLGL S A + G VGQ AR++ GV++ +I+ K+AGR VL+AG PGTGKTA+A+ +++ LG + PF I SEI+S E+ KTE LM+ FR+AIG+++ K + + P + + L + EA+ KE+V GDVI I+ +G Sbjct: 2 VQISEVKGNKRDNRTAAHTHIKGLGLKSDGYAEKQAAGFVGQAAARESCGVVVDLIRAQKMAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPIVGSEIYSAEVKKTEMLMENFRRAIGLKVRETKEVYEGEVTELTPEEAENPLGGYGKTISTLLIGLKSAKGQKKLRLDPSIYEAIQKERVTVGDVIYIEANTG 199
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_USTMA (RuvB-like helicase 1 OS=Ustilago maydis GN=RVB1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.492e-26 Identity = 70/195 (35.90%), Postives = 107/195 (54.87%), Query Frame = 2 Query: 65 SESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 S + +R RI HSHI+GLGL A ++G VGQ AR+A G++L +I+ K AG+A+L+AG PGTGKTA+A+ +++ LG + PF + SE++S E+ KTE LM+ FR+AIG+R+ K + + P + T L + E++ KE++ GDVI I+ +G Sbjct: 21 SSTSGASREARIATHSHIKGLGLSDDGTALPSAQGFVGQKAAREACGLVLDLIRMKKFAGKALLLAGGPGTGKTALALAVSQELGHKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRVRETKEVYEGEITELTPTEAENPLSGYGKTIAHVVIALKTVKGTKQLRLDPSIYESIMKERISVGDVIYIEANTG 215
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_SCHPO (RuvB-like helicase 1 OS=Schizosaccharomyces pombe GN=rvb1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.560e-26 Identity = 72/199 (36.18%), Postives = 106/199 (53.27%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-----VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +++SE + R RI HSHI+GLGL V G +GQ AR+A G+I +IK K G+ VL AG GTGKTA+A+ +A+ LG + PF + SE++S E+ KTEALM+ FR+AIG+R+K + A + ++T L + E+L +E+V +GDVI I+ +G Sbjct: 2 VQISEVKGNGRDNRITTHSHIKGLGLKEDGTCESVGGGFIGQEKAREACGIITDLIKSKKFGGKGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEALMENFRRAIGLRVK-ETKEVYEGEVTEMVPEEAENPLGGYGKTISHVLLGLKTHKGTKQLKLDPSIYESLQREQVSTGDVIYIEANTG 199
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_CRYNE (RuvB-like helicase 1 OS=Cryptococcus neoformans GN=RVB1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.263e-25 Identity = 56/115 (48.70%), Postives = 80/115 (69.57%), Query Frame = 2 Query: 86 RIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIK 430 R +RI HSHI+GLGL A S+G +GQ+ AR+A G+ L ++K GK +GR +L+ G PGTGKTA+A+ +++ LG + PF + SE++S E+ KTE L FR+AIG+RIK Sbjct: 28 REQRIATHSHIKGLGLADDGTAMSSSQGFIGQILAREALGLHLSLLKGGKYSGRPLLLVGPPGTGKTALALALSQELGSKVPFCAMVGSEVYSGEVKKTEVLGSCFRRAIGLRIK 142
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_ENCCU (RuvB-like protein 1 OS=Encephalitozoon cuniculi GN=RVB1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24 Identity = 64/190 (33.68%), Postives = 108/190 (56.84%), Query Frame = 2 Query: 80 LTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQI---DRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 + + I HSH+R LGLD + + ++GQ AR+AAG+I++M++ +++GRAVLI+G G+GKTA+A+G+++ LG TPF +S SE++S E+ KTE L +A R++I VR++ +I + P +S E+ L + E + K+++ +GDV+ I+ SG Sbjct: 1 MVKSSNIAIHSHVRSLGLDDCGNPVEKPDAVIGQENAREAAGLIVEMVRTKRMSGRAVLISGPVGSGKTALAVGISEELGAGTPFTSMSGSEVYSNEVKKTEVLEEALRRSILVRMRELKDVYEGEVVELRIVDEENPLSSYPKRIKEMFVILKTSKESKKLKLAPSLYEQIDKQRIVNGDVVYIEVNSG 190 The following BLAST results are available for this feature:
BLAST of CN181555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181555 ID=CN181555; Name=CN181555; organism=Citrus sinensis; type=EST; length=637bpback to top |