CN181554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB2_YARLI (RuvB-like helicase 2 OS=Yarrowia lipolytica GN=RVB2 PE=3 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 5.524e-52 Identity = 98/182 (53.85%), Postives = 138/182 (75.82%), Query Frame = -3 Query: 246 KKGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYINEVTIEADEDDANAM 791 ++GKAEIVPGVLFIDEVHMLD+ECFSF+NRALE++MAPI+++ATNRG + RGT+YKS HG+P+DLLDR++II T PY+ DE+++IL IR EE+VE++ +A ++LT +G TSLRY +LI+ + + +QKRK V ++D+ R Y LFLD RS Q+L + + T + E + +AM Sbjct: 281 EEGKAEIVPGVLFIDEVHMLDMECFSFINRALEDDMAPIVIMATNRGQSTTRGTDYKSPHGLPVDLLDRVIIIPTSPYSPDEVKQILQIRANEEEVELSPEALEILTSIGADTSLRYGSNLISVSHMLAQKRKASSVGLEDVKRAYSLFLDTARSVQFLSSSNNYVGEDGTAKLGEREKDAM 462
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB2_GIBZE (RuvB-like helicase 2 OS=Gibberella zeae GN=RVB2 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.321e-50 Identity = 93/167 (55.69%), Postives = 133/167 (79.64%), Query Frame = -3 Query: 291 KKGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 791 ++GKAEIVPGVLFIDEVHMLD+ECFS++NRALE+++AP++++A+NRG +RIRGT+Y+S HG+P+D LDR+ II+T YT +EI++I+ IR QEE+V++ DA LLT++G+ LRYA +LIT + L S KRK K VEV D+ R ++LF D RS +++ E + + I Sbjct: 274 EEGKAEIVPGVLFIDEVHMLDIECFSYINRALEDDLAPVVIMASNRGNSRIRGTDYRSPHGLPLDFLDRVAIINTHSYTPEEIKQIISIRAQEEEVDVHPDALALLTKIGQEAGLRYASNLITTSQLVSAKRKAKQVEVSDVQRSFQLFYDPARSIKFVAESEKRLI 440
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB2_NEUCR (RuvB-like helicase 2 OS=Neurospora crassa GN=rvb-2 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.031e-50 Identity = 94/167 (56.29%), Postives = 131/167 (78.44%), Query Frame = -3 Query: 291 KKGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 791 ++GKAEIVPGVLFIDEVHMLD+ECFS++NRALE+++API+++A+NRG ++IRGT+YKS HG+P+D LDR+ II+T YT DE+R+IL IR QEE+V++ DA LLT++G LRYA +LIT + L KRK K V V+D+ R ++LF D RS +++ E + + I Sbjct: 283 EEGKAEIVPGVLFIDEVHMLDIECFSYINRALESDLAPIVIMASNRGHSKIRGTDYKSPHGLPLDFLDRISIINTHSYTPDELRQILTIRAQEEEVDLTPDALALLTKIGAEAGLRYASNLITTSQLICAKRKAKQVGVEDVQRSFKLFYDPARSVKFVQESEKRLI 449
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_CRYNE (RuvB-like helicase 1 OS=Cryptococcus neoformans GN=RVB1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.667e-40 Identity = 83/170 (48.82%), Postives = 121/170 (71.18%), Query Frame = -3 Query: 315 KKGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNY-----------KSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYL 791 ++G AE+VPGVLFIDEVHMLD+ECF++LNRALE+ M+P +V+A+NRGI+ IRGT Y ++ HG+P+DLLDR +I+ T+ YTRDEIR+I+++RC+ E + ++ +A L GE +SLRYA+ L+T A + S+ + V V D++ + LFLD +RS L Sbjct: 305 EQGVAELVPGVLFIDEVHMLDMECFTYLNRALESPMSPYVVLASNRGISTIRGTEYDGVAGSASEGIRAPHGLPVDLLDRCMIVKTQLYTRDEIRRIVEMRCKVEGIAISSEAVDKLADEGERSSLRYALQLLTPAGIVSKNKGKGEVGVADVEELGELFLDAKRSAGVL 474
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_ASHGO (RuvB-like helicase 1 OS=Ashbya gossypii GN=RVB1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.411e-39 Identity = 85/167 (50.90%), Postives = 122/167 (73.05%), Query Frame = -3 Query: 291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788 +G AE+VPGVLFIDEV+MLD+E F+FLNRALE E+AP++V+A+NRG+T +RGT + SAHGIP DL+DRLLI+ T PYT+DEIR I++ R + E++++ + A LL +G SLRYA+ L+T A + + + + DI+ LFLD +RST+ ++E S Y+ Sbjct: 294 QGVAELVPGVLFIDEVNMLDIEIFTFLNRALELEIAPVVVLASNRGMTTVRGTEDVVSAHGIPPDLIDRLLIVRTLPYTQDEIRVIIEKRSKVENLQLEQAALDLLAAMGSDMSLRYALQLLTPAGILAATAGRTEILLSDIEEAKMLFLDAKRSTK-ILESNSNYL 459
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_SCHPO (RuvB-like helicase 1 OS=Schizosaccharomyces pombe GN=rvb1 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.363e-39 Identity = 80/158 (50.63%), Postives = 113/158 (71.52%), Query Frame = -3 Query: 321 KKGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQ 791 ++G AE++PGVLFIDEVHMLD+ECF++LN+ALE+ ++PI++ A+NRGI IRGT + ++ HGIP DLLDRLLI+ T PY+ EIR IL IR + E++ + ++ L + G TSLRY I L+T ++ + K + VQDI+ LFLD +RS Q Sbjct: 289 EQGIAELIPGVLFIDEVHMLDIECFTYLNQALESTISPIVIFASNRGICTIRGTEDIQAPHGIPTDLLDRLLIVRTLPYSESEIRSILQIRAKVENIILTDECLDKLAQEGSRTSLRYVIQLLTPVSIIASLHGNKEIGVQDIEECNDLFLDARRSAQ 446
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_DANRE (RuvB-like 1 OS=Danio rerio GN=ruvbl1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.662e-38 Identity = 79/167 (47.31%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788 +G AE+VPGVLFIDEVHMLD+ECF++L+RALE+ +API+V A+NRG IRGT + S HGIP+DLLDR++II T YT E+++I+ IR Q E + ++E+A L +G T+LRYA+ L+T A+L ++ + +VVE + ++ + LF D + S + L + ++++ Sbjct: 289 QGVAELVPGVLFIDEVHMLDIECFTYLHRALESSIAPIVVFASNRGNCLIRGTEDISSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGLNISEEALSHLGEIGTKTTLRYAVQLLTPASLLARVQGREVVEKEHVEEINELFYDAKSSAKILQDQHTKFM 455
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_USTMA (RuvB-like helicase 1 OS=Ustilago maydis GN=RVB1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.929e-38 Identity = 82/183 (44.81%), Postives = 123/183 (67.21%), Query Frame = -3 Query: 270 KKGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNYK---------SAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYINEVTIEA 791 ++G AE+VPGVLFIDEVHMLD+ECF++LNRALE+ ++P +++ATNRG +RGT Y+ + HGIP+DLLDR +I+ T PY +DEIR++L +R + E +AEDA + LT G +SLR+A+ L++ +++ ++ + ++DI LF+D +RS + LM I E T EA Sbjct: 305 EQGIAELVPGVLFIDEVHMLDMECFTYLNRALESTISPHVILATNRGQCMVRGTEYEGPASGTGIVAPHGIPLDLLDRCMIVRTMPYEKDEIREVLRLRAKVEGHLIAEDALEKLTEEGVSSSLRFALQLLSPSSILAKTAGRSEITIKDIVEANELFIDARRSAKVLMS-----IGEATTEA 482
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_AEDAE (RuvB-like helicase 1 OS=Aedes aegypti GN=pont PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.929e-38 Identity = 81/167 (48.50%), Postives = 116/167 (69.46%), Query Frame = -3 Query: 291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTN-YKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788 +G AE+VPGVLFIDEVHMLD+ECF++L+++LE+ +API++ ATNRG IRGT+ S HGIP+DLLDRLLI+ T PY EI +I+ +R Q E + + + A Q L+ +G+ T+LRYA+ L+T A + + DI V LFLD +RS ++L E ++Y+ Sbjct: 289 QGIAELVPGVLFIDEVHMLDLECFTYLHKSLESAIAPIVIFATNRGRCVIRGTDDIISPHGIPLDLLDRLLIVRTAPYNLSEIEQIIKLRAQTEGLSVEDSAIQALSEIGDNTTLRYAVQLLTPAHQNCKVNGRTQITKDDIVEVNGLFLDAKRSAKFLQEENTKYM 455
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_YEAST (RuvB-like protein 1 OS=Saccharomyces cerevisiae GN=RVB1 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.321e-37 Identity = 78/167 (46.71%), Postives = 118/167 (70.66%), Query Frame = -3 Query: 291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788 +G AE++PGVLFIDEV+MLD+E F++LN+ALE+ +AP++V+A+NRG+T +RGT + S HG+P DL+DRLLI+ T PY +DEIR I++ R E +++ A LL +G TSLRYA+ L+ + +Q K + V D++ LFLD +RST+ ++E + Y+ Sbjct: 298 QGVAELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTK-ILETSANYL 463 The following BLAST results are available for this feature:
BLAST of CN181554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181554 ID=CN181554; Name=CN181554; organism=Citrus sinensis; type=EST; length=802bpback to top |