CN181554

Overview
NameCN181554
Unique NameCN181554
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_CANAL (RuvB-like helicase 1 OS=Candida albicans GN=RVB1 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.321e-37
Identity = 81/163 (49.69%), Postives = 117/163 (71.78%), Query Frame = -3
Query:  309 KKGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTN--YKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLME 791
            ++G AE+VPGVLFIDEV+MLD+E F++LNRALE+ +API+V+A+NRG+T +RG++   K+ HG P DL+DRLLI+ T PY ++EI+ I+  R   E + + +DA + L++ G  TSLRYA+ L+T A + S       + VQDI+    LFLD +RST+ L E
Sbjct:  291 EQGVAELVPGVLFIDEVNMLDMEIFTYLNRALESSIAPIVVLASNRGLTTVRGSDDGVKAPHGCPPDLIDRLLIVRTLPYNQEEIKTIIGKRASLEGLTLTDDALEKLSKQGLTTSLRYAVQLLTPAGVLSTTAGRSEITVQDIEECEFLFLDSRRSTKVLQE 453          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_XENLA (RuvB-like 1 OS=Xenopus laevis GN=ruvbl1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.253e-37
Identity = 78/167 (46.71%), Postives = 117/167 (70.06%), Query Frame = -3
Query:  291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788
            +G AE+VPGVLFIDEVHMLD+ECF++L+RALE+ +API++ ATNRG   IRGT +  S HGIP+DLLDR++II T  YT  E+++I+ IR Q E + ++E+A   L  +G  T+LRY++ L+T A L ++      +E + ++ +  LF D + S + L E Q +++
Sbjct:  289 QGIAELVPGVLFIDEVHMLDIECFTYLHRALESSLAPIVIFATNRGNCIIRGTEDVASPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEINELFYDAKSSAKILAEQQEKFM 455          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_RAT (RuvB-like 1 OS=Rattus norvegicus GN=Ruvbl1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.556e-37
Identity = 76/167 (45.51%), Postives = 117/167 (70.06%), Query Frame = -3
Query:  291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788
            +G AE+VPGVLF+DEVHMLD+ECF++L+RALE+ +API++ A+NRG   IRGT +  S HGIP+DLLDR++II T  YT  E+++I+ IR Q E + ++E+A   L  +G  T+LRY++ L+T A L ++      +E + ++ +  LF D + S + L + Q +Y+
Sbjct:  289 QGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_MOUSE (RuvB-like 1 OS=Mus musculus GN=Ruvbl1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.556e-37
Identity = 76/167 (45.51%), Postives = 117/167 (70.06%), Query Frame = -3
Query:  291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788
            +G AE+VPGVLF+DEVHMLD+ECF++L+RALE+ +API++ A+NRG   IRGT +  S HGIP+DLLDR++II T  YT  E+++I+ IR Q E + ++E+A   L  +G  T+LRY++ L+T A L ++      +E + ++ +  LF D + S + L + Q +Y+
Sbjct:  289 QGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_HUMAN (RuvB-like 1 OS=Homo sapiens GN=RUVBL1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.562e-37
Identity = 76/167 (45.51%), Postives = 117/167 (70.06%), Query Frame = -3
Query:  291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788
            +G AE+VPGVLF+DEVHMLD+ECF++L+RALE+ +API++ A+NRG   IRGT +  S HGIP+DLLDR++II T  YT  E+++I+ IR Q E + ++E+A   L  +G  T+LRY++ L+T A L ++      +E + ++ +  LF D + S + L + Q +Y+
Sbjct:  289 QGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_YARLI (RuvB-like helicase 1 OS=Yarrowia lipolytica GN=RVB1 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.118e-36
Identity = 79/155 (50.97%), Postives = 111/155 (71.61%), Query Frame = -3
Query:  327 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTNYK-SAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRS 788
            +G AE+VPGVLFIDEV+MLDVECF++LNRALE+ ++PI+++A+NRG+ R+RG +   S HGI  DLLDRLLI+ T PY+ DEI+ I+  R   E  +++EDA   L + G  TSLRY + L++ A + ++     VVEV+D++    LFLD  RS
Sbjct:  290 QGVAELVPGVLFIDEVNMLDVECFTYLNRALESTISPIVILASNRGMCRVRGVDDDVSPHGITTDLLDRLLIVRTLPYSLDEIKTIIQKRAVVEQQQISEDALDALAQHGARTSLRYGLQLLSPAGVLAKSEGRDVVEVKDVEECESLFLDATRS 444          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_KLULA (RuvB-like helicase 1 OS=Kluyveromyces lactis GN=RVB1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.491e-36
Identity = 74/167 (44.31%), Postives = 119/167 (71.26%), Query Frame = -3
Query:  291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGTN-YKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788
            +G AE+VPGVLFIDEV+MLD+E F++LNRALE+++AP++V+A+NRG+  +RGT+   S HG+P DL+DRLLI+ T PY R+EI+ I+  R   E++++ ++A + L  +G  TSLRY + L++ + + ++      + V D++    LFLD +RST+ ++E    Y+
Sbjct:  292 QGVAELVPGVLFIDEVNMLDIEIFTYLNRALESDIAPVVVLASNRGMITVRGTDDVVSPHGVPPDLIDRLLIVRTLPYNREEIKTIISKRAAVENLQVEDEALEFLATLGTETSLRYVLQLLSPSGIIAKIANRAEISVADVEEAKLLFLDAKRSTK-ILEQSENYL 457          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_CANGA (RuvB-like helicase 1 OS=Candida glabrata GN=RVB1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.491e-36
Identity = 76/167 (45.51%), Postives = 119/167 (71.26%), Query Frame = -3
Query:  291 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLMEYQSQYI 788
            +G AE++PGVLFIDE +MLD+E F++LN+ALE+++API+V+A+NRG+T +RGT +  S HGIP DL+DRLLI+ T PY +DEIR I++ R   E++ + + A  +L  +   TSLRYA+ L++ A + S     + + + DI+    LF+D +RST+ ++E   +Y+
Sbjct:  292 QGVAELIPGVLFIDEANMLDIEIFTYLNKALESDIAPIVVLASNRGMTTVRGTEDVISPHGIPADLIDRLLIVRTLPYNKDEIRLIIERRSAVENLALEDGALDILADMATHTSLRYALQLLSPAGILSSTAGRQKITIDDINEAKMLFIDAKRSTK-ILENSDRYM 457          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_GIBZE (RuvB-like helicase 1 OS=Gibberella zeae GN=RVB1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.466e-36
Identity = 79/159 (49.69%), Postives = 109/159 (68.55%), Query Frame = -3
Query:  315 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT-NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYL 788
            +G AE+VPGVLFIDE HMLDVECF++LNRALE+ +API+V+A+NRG+  IRGT +  +AHGIP D L R+LII T PY  DEI++I+ IR   E V +++ A   ++  G   SLRY + L+T A++ ++      ++VQD+     LFLD  RS   L
Sbjct:  290 QGVAELVPGVLFIDEAHMLDVECFTYLNRALESPIAPIVVLASNRGMCTIRGTDDIVAAHGIPSDFLARMLIIPTTPYEADEIKRIVRIRSTTEGVSVSDAAIDKISEHGVRISLRYCLQLLTPASILAKANGRSQIDVQDVAECEDLFLDASRSAALL 448          
BLAST of CN181554 vs. ExPASy Swiss-Prot
Match: RUVB1_DEBHA (RuvB-like helicase 1 OS=Debaryomyces hansenii GN=RBV1 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.754e-35
Identity = 79/162 (48.77%), Postives = 112/162 (69.14%), Query Frame = -3
Query:  309 KGKAEIVPGVLFIDEVHMLDVECFSFLNRALENEMAPILVVATNRGITRIRGT--NYKSAHGIPMDLLDRLLIISTKPYTRDEIRKILDIRCQEEDVEMAEDAKQLLTRVGEGTSLRYAIHLITAAALASQKRKGKVVEVQDIDRVYRLFLDVQRSTQYLME 788
            +G AE++PGVLFIDEV+MLD+ECF++LNRALE+ +API+V+A+NRG+T IRGT  + KS HG P DL+DRLLI+ T PY ++EI+ I+  R   E++ +  DA   L+  G   SLRYA+ L+  A + S+      +  +DI+    LFLD +RS + L E
Sbjct:  291 QGVAELIPGVLFIDEVNMLDIECFTYLNRALESSIAPIVVLASNRGMTTIRGTDDDKKSPHGCPADLIDRLLIVRTLPYNQEEIKIIISKRATLENLIVTPDALDKLSLHGINNSLRYALQLLAPAGVLSKTAGRNEITSEDIEECEILFLDSRRSIKILEE 452          
The following BLAST results are available for this feature:
BLAST of CN181554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
RUVB1_CANAL1.321e-3749.69RuvB-like helicase 1 OS=Candida albicans GN=RVB1 P... [more]
RUVB1_XENLA2.253e-3746.71RuvB-like 1 OS=Xenopus laevis GN=ruvbl1 PE=2 SV=1[more]
RUVB1_RAT6.556e-3745.51RuvB-like 1 OS=Rattus norvegicus GN=Ruvbl1 PE=1 SV... [more]
RUVB1_MOUSE6.556e-3745.51RuvB-like 1 OS=Mus musculus GN=Ruvbl1 PE=1 SV=1[more]
RUVB1_HUMAN8.562e-3745.51RuvB-like 1 OS=Homo sapiens GN=RUVBL1 PE=1 SV=1[more]
RUVB1_YARLI1.118e-3650.97RuvB-like helicase 1 OS=Yarrowia lipolytica GN=RVB... [more]
RUVB1_KLULA2.491e-3644.31RuvB-like helicase 1 OS=Kluyveromyces lactis GN=RV... [more]
RUVB1_CANGA2.491e-3645.51RuvB-like helicase 1 OS=Candida glabrata GN=RVB1 P... [more]
RUVB1_GIBZE9.466e-3649.69RuvB-like helicase 1 OS=Gibberella zeae GN=RVB1 PE... [more]
RUVB1_DEBHA2.754e-3548.77RuvB-like helicase 1 OS=Debaryomyces hansenii GN=R... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B22_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181554 ID=CN181554; Name=CN181554; organism=Citrus sinensis; type=EST; length=802bp
CTTTTTTCAAAATTATAACGCTGGGGAATCGCCGGAGCCTGTCACATAAT
TAACAAACCAATATCTTTCCAACTGTAGCATACCGGAAGGTGGAAAGATC
CACAACTATTTAAACCAAAACACGTGCCACATATGTATGGATAAAGCATA
GCTAAATGTTGCAAGTACTGGCAATAACTACAATTAACAAGGCGAGATTG
ATGCATAATCGCAACATCTCAAGTCTGGAGTAACTATTCTGGGACCATGG
CATTGGCATCATCTTCATCAGCTTCTATTGTCACTTCATTGATGTACTGA
CTCTGGTATTCCATCAAATACTGAGTTGATCTCTGTACATCCAAAAATAG
ACGGTAGACGCGATCAATGTCCTGAACTTCCACAACTTTTCCTTTCCGTT
TCTGAGATGCCAATGCAGCAGCTGTTATAAGATGGATGGCATATCTCAAG
GATGTTCCTTCCCCAACACGGGTCAACAATTGCTTTGCATCTTCAGCCAT
CTCCACATCTTCCTCCTGGCATCTGATATCTAGAATTTTGCGAATTTCAT
CCCTAGTATAGGGTTTAGTAGAGATGATGAGTAGGCGATCAAGAAGATCC
ATCGGAATCCCATGAGCAGATTTGTAGTTTGTGCCCCTGATTCTAGTGAT
CCCTCTGTTGGTAGCAACAACTAAAATTGGAGCCATCTCATTCTCCAGAG
CACGATTCAGGAAGGAAAAGCACTCGACGTCAAGCATGTGCACCTCATCA
ATAAAGAGGACACCTGGCACAATCTCTGCCTTTCCTTTCTTCCCTCCACT
CT
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