CN181551

Overview
NameCN181551
Unique NameCN181551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:10..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.767e-39
Identity = 90/166 (54.22%), Postives = 102/166 (61.45%), Query Frame = 2
Query:  122 SSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            SSS    S  S  K G +S      L+ S +    +  L+GVVF+PFEEVKKE            AR  Y  ECEAA+NEQINVEYNVSYVYHALYAYFDRDN+AL+GL                  MEYQN RGG+VKL  ++ P SEFDH EKGDALYAMELAL
Sbjct:   26 SSSSSISSPVSSGKSGNLS----FPLRASKSSTTTTSTLSGVVFEPFEEVKKEMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELAL 187          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.532e-39
Identity = 79/135 (58.52%), Postives = 93/135 (68.89%), Query Frame = 2
Query:  215 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            V A+++PLTGV+F+PFEEVKK             ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH+I   PSEF+H EKGDALYAMELAL
Sbjct:   47 VCASTVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELAL 181          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.532e-39
Identity = 85/148 (57.43%), Postives = 96/148 (64.86%), Query Frame = 2
Query:  176 SPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            SP   R   V AA   N+  LTGVVF+PFEEVKKE            AR K+ D+ E+AIN+QINVEYNVSYVYHALYAYFDRDN+ L+G                   MEYQN RGG+VKL SI+ P SEFDH EKGDAL+AMELAL
Sbjct:   35 SPSGSR-FSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELAL 181          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.837e-39
Identity = 83/143 (58.04%), Postives = 101/143 (70.63%), Query Frame = 2
Query:  191 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RS +V AA +A + PL GV+F+PF+E+KK+          X ARQ Y D+ E+AINEQINVEYNVSYVYHAL+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H+EKGDALYAMELAL
Sbjct:   42 RSSRVCAASNAPA-PLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELAL 183          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 159.844 bits (403), Expect = 9.837e-39
Identity = 79/135 (58.52%), Postives = 92/135 (68.15%), Query Frame = 2
Query:  215 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            V A+++PLTGV+F+PFEEVKK             ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELAL
Sbjct:   47 VCASTVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELAL 181          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 6.376e-38
Identity = 77/135 (57.04%), Postives = 90/135 (66.67%), Query Frame = 2
Query:  215 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            V A + PLTGV+F+PFEEVKK+            ARQ + DECE+ INEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELAL
Sbjct:   45 VSATTAPLTGVIFEPFEEVKKDYLAVPSVPLVSLARQNFADECESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELAL 179          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 7.049e-37
Identity = 79/146 (54.11%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  182 RTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            R+  SL  +AA       L+GVVFQPFEE+K E            AR K+ D+CEAAINEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMEL L
Sbjct:   34 RSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTL 179          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.018e-35
Identity = 74/128 (57.81%), Postives = 87/128 (67.97%), Query Frame = 2
Query:  236 LTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            L+GVVFQPFEE+K E            AR K+ D+CEAA+NEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMELAL
Sbjct:   55 LSGVVFQPFEEIKGELALVPQSPDKSLARHKFVDDCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELAL 182          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI2_RANCA (Ferritin, middle subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.868e-13
Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                  M+YQN RGG+V L  I +P    +  E G+ L AM+ AL
Sbjct:    6 RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKP----ERDEWGNTLEAMQAAL 101          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.211e-12
Identity = 42/101 (41.58%), Postives = 53/101 (52.48%), Query Frame = 2
Query:  317 ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            ARQ Y  E EA IN QIN+E   SY Y ++  YFDRD++AL G                   M+YQN RGG++ L  I +P    D  E G  L AM++AL
Sbjct:    6 ARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVAL 102          
The following BLAST results are available for this feature:
BLAST of CN181551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
FRI3_ARATH5.767e-3954.22Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI_MALXI7.532e-3958.52Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI2_ARATH7.532e-3957.43Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_SOYBN9.837e-3958.04Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_SOYBN9.837e-3958.52Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI1_PEA6.376e-3857.04Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI2_MAIZE7.049e-3754.11Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI1_MAIZE1.018e-3557.81Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI2_RANCA1.868e-1339.00Ferritin, middle subunit OS=Rana catesbeiana PE=1 ... [more]
FRIS_LYMST1.211e-1241.58Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181551 ID=CN181551; Name=CN181551; organism=Citrus sinensis; type=EST; length=619bp
GAGGATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGCACTTGC
TTACATCAATGGCATTGGCAGCTTCTTCTTCCTCCTCTCTTGCAGCGAAG
CAACTGGCTGGTCTTATAACAAGCTCATCATGTTACACTAAGTCTACTGC
TTCTCTTGTGAAATTGGGTTGTATTTCGCCGAGAACGAAGAGGAGTCTGA
AGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGGGTCGTG
TTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCCTGTTTC
CCCTCTGCTTTCACTAGCTCGCCAAAAGTATGAGGACGAGTGTGAGGCCG
CTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTGTACCAT
GCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGGCCTTGC
CAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTGAGAAGT
TTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAAACTGCACTCCATA
ATGCAGCCCCCTTCGGAGTTTGATCATGCGGAGAAAGGGGATGCCTTGTA
TGCAATGGAACTAGCATTG
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