CN181551

Overview
NameCN181551
Unique NameCN181551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:10..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.523e-12
Identity = 38/100 (38.00%), Postives = 52/100 (52.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ Y +ECEA +N+QIN+E   SYVY  +  +F+RD++AL G                   M YQN+RGG++ L  I  PP           L+AM+ AL
Sbjct:    5 RQNYHEECEAGVNKQINMELYASYVYMTMAFHFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAPP----QLSWNSGLHAMQDAL 100          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH_CHICK (Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12
Identity = 40/100 (40.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ Y  +CEAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL
Sbjct:    9 RQNYHQDCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECAL 104          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 38/100 (38.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ +  +CEAAIN QIN+E   SY Y ++  YFDRD++AL G                   +++QN RGG++ L  + +P    D  E G  L A+E AL
Sbjct:    6 RQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEEREHAEKLLKFQNQRGGRIFLQDVKKP----DRDEWGSGLDALECAL 101          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH_TRENE (Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-11
Identity = 39/100 (39.00%), Postives = 52/100 (52.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ +  +CEAAIN QIN+E   SY Y ++  YFDRD++AL G                   M+ QN RGG++ L  + +P    D  E G  L A+E AL
Sbjct:    6 RQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKHQSEEEREHAEKLMKQQNQRGGRIFLQDVKKP----DRDEWGSGLDALECAL 101          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH_HORSE (Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 5.087e-11
Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ Y  + EAAIN QIN+E + SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL
Sbjct:   10 RQNYHQDSEAAINRQINLELHASYVYLSMSFYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DQDDWENGLKAMECAL 105          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH_MOUSE (Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL
Sbjct:   10 RQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECAL 105          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ +  +CEAAIN  +N+E   SYVY ++  YFDRD++AL  +                  ++YQN RGG+V L  I +P    +  E G+ L A + AL
Sbjct:    6 RQNFHSDCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWGNTLEATQAAL 101          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ +  +CEAAIN  +N+E   SYVY ++  YFDRD++AL  +                  ++YQN RGG+V L  I +P    +  E  + L AM+ AL
Sbjct:    6 RQNFNSDCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWSNTLEAMQAAL 101          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH_CRIGR (Ferritin heavy chain OS=Cricetulus griseus GN=FTH1 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.677e-11
Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL
Sbjct:   15 RQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECAL 110          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRIH3_XENLA (Ferritin heavy chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.677e-11
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query:  320 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            RQ +  ECEAAIN Q+N+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    +  E  + L A+E +L
Sbjct:    6 RQNFHQECEAAINRQVNMELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKMQNQRGGRLFLQDIKKP----ERDEWANGLEALECSL 101          
The following BLAST results are available for this feature:
BLAST of CN181551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
FRIH1_SCHMA3.523e-1238.00Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH_CHICK7.848e-1240.00Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 ... [more]
FRIH_PAGBE1.748e-1138.00Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]
FRIH_TRENE2.284e-1139.00Ferritin, heavy subunit OS=Trematomus newnesi PE=1... [more]
FRIH_HORSE5.087e-1139.00Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=... [more]
FRIH_MOUSE6.644e-1139.00Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 ... [more]
FRIH2_XENLA6.644e-1137.00Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]
FRIH1_XENLA6.644e-1137.00Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]
FRIH_CRIGR8.677e-1139.00Ferritin heavy chain OS=Cricetulus griseus GN=FTH1... [more]
FRIH3_XENLA8.677e-1137.00Ferritin heavy chain, oocyte isoform OS=Xenopus la... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181551 ID=CN181551; Name=CN181551; organism=Citrus sinensis; type=EST; length=619bp
GAGGATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGCACTTGC
TTACATCAATGGCATTGGCAGCTTCTTCTTCCTCCTCTCTTGCAGCGAAG
CAACTGGCTGGTCTTATAACAAGCTCATCATGTTACACTAAGTCTACTGC
TTCTCTTGTGAAATTGGGTTGTATTTCGCCGAGAACGAAGAGGAGTCTGA
AGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGGGTCGTG
TTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCCTGTTTC
CCCTCTGCTTTCACTAGCTCGCCAAAAGTATGAGGACGAGTGTGAGGCCG
CTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTGTACCAT
GCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGGCCTTGC
CAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTGAGAAGT
TTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAAACTGCACTCCATA
ATGCAGCCCCCTTCGGAGTTTGATCATGCGGAGAAAGGGGATGCCTTGTA
TGCAATGGAACTAGCATTG
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