CN181550

Overview
NameCN181550
Unique NameCN181550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_MOUSE (Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17
Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  322 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 744
            YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L  GD
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLGHGD 180          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_BOVIN (Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17
Identity = 50/145 (34.48%), Postives = 77/145 (53.10%), Query Frame = -1
Query:  319 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMV---GKGHGLWHFDQMLLHEGDA 744
            YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LE+  N+ LL LH +A   NDP + +F+E+ +L EQVEAI ++  +++ LR +   G G   + FD+  L   ++
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKMGAPGSGMAEYLFDKHTLGHSES 181          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_PONAB (Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 3.059e-17
Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = -1
Query:  322 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 744
            YFDRD++AL+                    M+ QN RGG++ L  I +P  + D  E G  L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L + D
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSD 180          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_FELCA (Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 3.059e-17
Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = -1
Query:  319 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGDA 744
            YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L   D+
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGTPESGMAEYLFDKHTLGNSDS 181          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.059e-17
Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = -1
Query:  331 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 744
            +F+RD++AL G                   M YQN+RGG++ L  I  PP           L+AM+ AL LEK  N+ L+ L +V +R+ D    +F+ +E+L  QV+++ K++ Y++ L  VG G G + FD+  LH
Sbjct:   36 HFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAPPQ----LSWNSGLHAMQDALDLEKKVNQSLMELVAVGERHRDTHFCDFINNEYLEIQVQSMKKLSDYITNLIRVGNGLGEYTFDKETLH 169          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIL_XENLA (Ferritin light chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.996e-17
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  328 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMV---GKGHGLWHFDQMLLHE 744
            YFDRD++AL                    F+++QN RGG+V L  + +P    D  E G+   AME+AL+LEK  N+ +L LH +A  + DP M +++E EFL E+V+ I K+  +++ LR V    +G G + FD++ L E
Sbjct:   39 YFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGRVVLQDVKKP----DDDEWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEFLEEEVKLIKKLGDHLTNLRRVKAAEEGMGEYLFDKLTLGE 176          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_SHEEP (Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.996e-17
Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = -1
Query:  361 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGK---GHG 744
            YFDRD++AL+                    M+ QN RG ++ L  I +P    D  +  + L AME AL LE+  N+ LL LH +A   NDP + +F+E+ +L EQVEAI ++  +++ LR +G    GHG
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGARIFLQDIKKP----DRDDWENGLNAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKMGALWIGHG 167          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_RAT (Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.996e-17
Identity = 51/144 (35.42%), Postives = 75/144 (52.08%), Query Frame = -1
Query:  322 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 744
            YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AM  AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L  GD
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMRCALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTLGHGD 180          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_CANFA (Ferritin heavy chain OS=Canis familiaris GN=FTH1 PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.996e-17
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  322 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 744
            YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L   D
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTLGNSD 180          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRI1_RANCA (Ferritin, higher subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 5.219e-17
Identity = 50/142 (35.21%), Postives = 77/142 (54.23%), Query Frame = -1
Query:  328 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHE 744
            YFDRD+IAL  +                  M+ QN RGG++ L  + +P  +    E G+ L AM+ AL LEK  N+ LL LH V     DP + +F+E+E+L EQV++I ++  Y++ L+ +G    G G + FD+  + E
Sbjct:   37 YFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQDVKKPERD----EWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYLEEQVKSIKQLGDYITNLKRLGLPQNGMGEYLFDKHTMGE 174          
The following BLAST results are available for this feature:
BLAST of CN181550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRIH_MOUSE2.342e-1736.11Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 ... [more]
FRIH_BOVIN2.342e-1734.48Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV... [more]
FRIH_PONAB3.059e-1737.50Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 ... [more]
FRIH_FELCA3.059e-1735.17Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 S... [more]
FRIH1_SCHMA3.059e-1734.06Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIL_XENLA3.996e-1736.62Ferritin light chain, oocyte isoform OS=Xenopus la... [more]
FRIH_SHEEP3.996e-1736.64Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV... [more]
FRIH_RAT3.996e-1735.42Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 ... [more]
FRIH_CANFA3.996e-1735.42Ferritin heavy chain OS=Canis familiaris GN=FTH1 P... [more]
FRI1_RANCA5.219e-1735.21Ferritin, higher subunit OS=Rana catesbeiana PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B20_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181550 ID=CN181550; Name=CN181550; organism=Citrus sinensis; type=EST; length=750bp
GAACTTTTATTGAACAACTTAATTATATTTATACAATCAGAAGATGGATT
TGGTGCTCTGCTTAAACTATTAGATCCCTTCACACAGTCTGTTACTAAAT
AAAGAAAAAGCACCATCAAAAAGACTATCTAAATGCGACCACACTAATAT
GATAAAGCAAGGAGGCTATTGAGTATTAACTTTGTAGGACTTAACACTGT
TTCAGCTTATTTTTTGTCAACACACTCAACCTCCTGTGGCAGAGATACTT
CAGAACATTTGGCAGAAAAGAGTTGACTAAAGCACAAAGAAATGTAACAA
TATGGTTCTTCATCATGCAGCATCACCCTCGTGGAGAAGCATTTGATCGA
AGTGCCATAATCCGTGGCCTTTCCCAACCATCCTCAGTTGAGAAACATAT
TTTGCGATCTTGTTAATTGCTTCAACCTGCTCACCCAAAAATTCACTCTC
GACAAACTCTGCCATTTGGGGATCATTGTTTCTATCCGCCACACTGTGCA
GGCTCAGAAGCTTCTCGTTTGTTAGCTTCTCCAGGGACAATGCTAGTTCC
ATTGCATACAAGGCATCCCCTTTCTCCGCATGATCAAACTCCGAAGGGGG
CTGCATTATGGAGTGCAGTTTTACTTTTCCACCGCGCAAGTTCTGATACT
CCATAAACTTCTCAGCATGTTCCCTTTCTTCTTCACTGGACTCCTTGAAA
AATTTGGCAAGGCCTCTCAGAGCAATATTATCCCGATCAAAGTACGCATA
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