CN181550

Overview
NameCN181550
Unique NameCN181550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.902e-17
Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = -1
Query:  328 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHE 744
            YFDRD++AL  +                 F++YQN RGG+V L  I +P  +    E G+ L A + AL LEK  N+ LL LH +A    D  + +F+ESE+L EQV+A+ ++  Y++ L+ +G    G G + FD+  L E
Sbjct:   37 YFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKPERD----EWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVKAMKQLGDYITNLKRLGVPQNGMGEYLFDKHTLGE 174          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_CRIGR (Ferritin heavy chain OS=Cricetulus griseus GN=FTH1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.518e-16
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = -1
Query:  373 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 744
            YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G
Sbjct:   46 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMG 165          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_SALSA (Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = -1
Query:  373 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 744
            YFDRD+ AL                     M+ QN RGG++ L  + +P  +    E G  + A+E +L LEK  N+ LL LH V   +NDP M +F+E+ +L EQV++I ++  +V+ LR +G
Sbjct:   37 YFDRDDQALHNFAKFFKNQSHEEREHAEKLMKVQNQRGGRIFLQDVKKPEKD----EWGSGVEALESSLQLEKSVNQSLLDLHKVCSEHNDPHMCDFIETHYLDEQVKSIKELGDWVTNLRRMG 156          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRI3_RANCA (Ferritin, lower subunit OS=Rana catesbeiana PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.842e-16
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = -1
Query:  364 AYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGH 747
            +YF+RD++AL                     +EYQN RGG+V L S+ +P  +    +  + L A++ AL L+K  N+ LL LH+VA   +DP M +F+ES +L E VE I K+  +++ L+ +   H
Sbjct:   36 SYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKPERD----DWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESPYLSESVETIKKLGDHITSLKKLWSSH 159          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIM_SALSA (Ferritin, middle subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.285e-15
Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  385 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQL 744
            YF RD++AL G                   + +QN RGG++ L  I +P  +    E G+ L AM+ AL LEK  N+ LL LH +A    DP + +F+E+ +L EQVEAI K+  +++ L
Sbjct:   37 YFSRDDVALPGFAHFFKENSEEEREHADKLLSFQNKRGGRILLQDIKKPERD----EWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLETHYLNEQVEAIKKLGDHITNL 152          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH3_XENLA (Ferritin heavy chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15
Identity = 46/142 (32.39%), Postives = 77/142 (54.23%), Query Frame = -1
Query:  328 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHE 744
            YFDRD++AL+                    M+ QN RGG++ L  I +P  +    E  + L A+E +L LEK  N+ +L LH ++  +NDP + +F+ES +L EQV+++ ++  +++ LR +G    G   + FD+  L E
Sbjct:   37 YFDRDDVALKNFAKYFLHQSHEEREHAEKLMKMQNQRGGRLFLQDIKKPERD----EWANGLEALECSLQLEKNVNQSILELHKLSTDHNDPHLCDFLESHYLDEQVKSMKELGDHITNLRRMGAPSNGLAEYLFDKHTLGE 174          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRI_PACLE (Ferritin OS=Pacifastacus leniusculus PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15
Identity = 50/137 (36.50%), Postives = 72/137 (52.55%), Query Frame = -1
Query:  337 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG-KGHGLWHFDQML 744
            YFDRD+I+L G                   M+YQN RG ++ L +I  P  +    E G+   A++ AL LE   N+ LL L + A + NDP +   +E EFL EQVE+I KI   +++L+  G  G G + FD+ L
Sbjct:   36 YFDRDDISLPGASKFFKDSSDEEREHGQKLMKYQNKRGARIVLQAIAAPSLQ----EWGNLHDALQAALDLENEVNQSLLDLDATASKINDPHLTNMLEGEFLEEQVESIEKIGNLITRLKRAGTSGLGEFLFDKEL 168          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FHL19_HUMAN (Putative ferritin heavy polypeptide-like 19 OS=Homo sapiens GN=FTHL19 PE=5 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15
Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = -1
Query:  373 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 744
            YFD+D+ AL                     M  QNLRGG++ LH I +P  E    E G  L AME    LEK  N+ LL LH +A  N DPQ+ +F+E++FL +Q + I ++  Y+S L  +G
Sbjct:    4 YFDQDDAALEHFDRYFLRQSQEKREHAQELMSLQNLRGGRICLHDIRKP--EGQGWESG--LKAMECTFHLEKNINQSLLELHQLARENGDPQLCDFLENDFLNQQAKTIKELGGYLSNLHKMG 123          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FHL17_HUMAN (Ferritin heavy polypeptide-like 17 OS=Homo sapiens GN=FTHL17 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15
Identity = 49/123 (39.84%), Postives = 64/123 (52.03%), Query Frame = -1
Query:  376 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMV 744
            YF+RD++AL                     M  QNLRGG + LH I +P  E    E G  L AME A  LEK  N+ LL L+ +A    DPQ+  F+ES +L EQV+ I ++  YVS LR +
Sbjct:   41 YFNRDDVALENFFRYFLRLSDDKMEHAQKLMRLQNLRGGHICLHDIRKP--ECQGWESG--LVAMESAFHLEKNVNQSLLDLYQLAVEKGDPQLCHFLESHYLHEQVKTIKELGGYVSNLRKI 159          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIM_TRENE (Ferritin, middle subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  385 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQL 744
            YF RD++AL G                   + +QN RGG++ L  I +P  +    E G  L A++ +L LEK  N+ LL LH +A  + DP M +F+E+ +L EQVE+I K+  +++ L
Sbjct:   37 YFSRDDVALPGFAHFFKENSEEEREHADKLLTFQNSRGGRIFLQDIKKPERD----EWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTDPHMCDFLETHYLNEQVESIKKLGDFITNL 152          
The following BLAST results are available for this feature:
BLAST of CN181550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRIH2_XENLA8.902e-1736.62Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]
FRIH_CRIGR1.518e-1637.10Ferritin heavy chain OS=Cricetulus griseus GN=FTH1... [more]
FRIH_SALSA5.770e-1635.48Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1[more]
FRI3_RANCA9.842e-1634.38Ferritin, lower subunit OS=Rana catesbeiana PE=1 S... [more]
FRIM_SALSA1.285e-1536.67Ferritin, middle subunit OS=Salmo salar PE=2 SV=1[more]
FRIH3_XENLA3.740e-1532.39Ferritin heavy chain, oocyte isoform OS=Xenopus la... [more]
FRI_PACLE4.884e-1536.50Ferritin OS=Pacifastacus leniusculus PE=1 SV=1[more]
FHL19_HUMAN4.884e-1537.90Putative ferritin heavy polypeptide-like 19 OS=Hom... [more]
FHL17_HUMAN4.884e-1539.84Ferritin heavy polypeptide-like 17 OS=Homo sapiens... [more]
FRIM_TRENE6.379e-1535.00Ferritin, middle subunit OS=Trematomus newnesi PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B20_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181550 ID=CN181550; Name=CN181550; organism=Citrus sinensis; type=EST; length=750bp
GAACTTTTATTGAACAACTTAATTATATTTATACAATCAGAAGATGGATT
TGGTGCTCTGCTTAAACTATTAGATCCCTTCACACAGTCTGTTACTAAAT
AAAGAAAAAGCACCATCAAAAAGACTATCTAAATGCGACCACACTAATAT
GATAAAGCAAGGAGGCTATTGAGTATTAACTTTGTAGGACTTAACACTGT
TTCAGCTTATTTTTTGTCAACACACTCAACCTCCTGTGGCAGAGATACTT
CAGAACATTTGGCAGAAAAGAGTTGACTAAAGCACAAAGAAATGTAACAA
TATGGTTCTTCATCATGCAGCATCACCCTCGTGGAGAAGCATTTGATCGA
AGTGCCATAATCCGTGGCCTTTCCCAACCATCCTCAGTTGAGAAACATAT
TTTGCGATCTTGTTAATTGCTTCAACCTGCTCACCCAAAAATTCACTCTC
GACAAACTCTGCCATTTGGGGATCATTGTTTCTATCCGCCACACTGTGCA
GGCTCAGAAGCTTCTCGTTTGTTAGCTTCTCCAGGGACAATGCTAGTTCC
ATTGCATACAAGGCATCCCCTTTCTCCGCATGATCAAACTCCGAAGGGGG
CTGCATTATGGAGTGCAGTTTTACTTTTCCACCGCGCAAGTTCTGATACT
CCATAAACTTCTCAGCATGTTCCCTTTCTTCTTCACTGGACTCCTTGAAA
AATTTGGCAAGGCCTCTCAGAGCAATATTATCCCGATCAAAGTACGCATA
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