CN181550

Overview
NameCN181550
Unique NameCN181550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:416..1165. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIL_FELCA (Ferritin light chain OS=Felis catus GN=FTL PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13
Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = -1
Query:  382 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLR 744
            YFDRD++AL G+                  ++ QN RGG+     + +P  +    E G  L AME AL LEK  N+ LL LH++     DP + +F+E+ FL E+V+ I K+  +++ LR
Sbjct:   37 YFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFLDVQKPSQD----EWGKTLDAMEAALLLEKNLNQGLLDLHALGSARADPHLCDFLENHFLDEEVKLIKKMGDHLTNLR 153          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIL_BOVIN (Ferritin light chain OS=Bos taurus GN=FTL PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13
Identity = 45/140 (32.14%), Postives = 72/140 (51.43%), Query Frame = -1
Query:  334 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLL 744
            YFDRD++AL G+                  ++ QN RGG+     + +P  +    E G    AME AL +EK  N+ LL LH +A    DP + +F+E+ FL E+V+ I K+  +++ LR +     G G + F+++ L
Sbjct:   37 YFDRDDVALEGVGHFFRELAKEKREGAERLLKLQNQRGGRALFLDVQKPSQD----EWGKTQDAMEAALLVEKNLNQALLDLHGLASARGDPHICDFLENHFLDEEVKLIKKMGDHLTNLRRLAGPQAGLGEYLFERLTL 172          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIH_PIG (Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13
Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = -1
Query:  373 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 744
            YFDRD++AL+                    M+ Q  RG ++ L  IM+P  E D  E G  L AME AL + K   + LL LH +A   NDP + +F+E+ +L EQV+AI ++  +++ L  +G
Sbjct:   41 YFDRDDVALKNFAKYFLHQSHGGRGHAEKLMKLQTQRGARIFLQDIMKP--ERDDWENG--LTAMEFALHVVKNVYQSLLELHKLATDKNDPHLCDFIETHYLHEQVKAIKELGDHITNLHRMG 160          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FRIL2_MOUSE (Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = -1
Query:  376 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMV 744
            +FDRD++AL G+                  ++ QN RGG+     + +P  +    E G  L A++ AL LEK  N+ LL LH++     DP + +F+ES FL ++V+ I K+  +++ LR V
Sbjct:   37 FFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAIQAALRLEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHLTNLRRV 155          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FTMT_BOVIN (Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = -1
Query:  373 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 744
            YF RD++AL                     M  QN RGG + L  I +P    D  +    L AME AL LEK  N+ LL LH++A    DP + +F+E+ +L EQV++I ++  +V+ L  +G
Sbjct:  100 YFSRDDVALHNFARYFLRLSREEAEHAEKLMRLQNQRGGLICLQDIKKP----DQNDWKSGLNAMECALLLEKNVNQSLLELHTLASDKGDPHLCDFLETHYLNEQVKSIKELGDHVNNLVKMG 219          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FTMT_MOUSE (Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = -1
Query:  373 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 744
            YF RD++AL                     M+ QN RGG++ L  I +P    D  E G  L AME AL LEK  N+ LL LH++A    DP + +F+E+ +L EQV++I ++  +V  L  +G
Sbjct:   96 YFSRDDVALYNFSKYFLRQSLEEREHAEKLMKLQNQRGGRICLQDIKKPDK--DDWECG--LRAMECALLLEKNVNQSLLDLHTLASEKGDPHLCDFLETHYLHEQVKSIKELGDHVHNLVTMG 215          
BLAST of CN181550 vs. ExPASy Swiss-Prot
Match: FHL17_MOUSE (Ferritin heavy polypeptide-like 17 OS=Mus musculus GN=Fthl17 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.963e-12
Identity = 40/124 (32.26%), Postives = 60/124 (48.39%), Query Frame = -1
Query:  373 YFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG 744
            YFDRD++A                     FM  QN RGG + L  I +P  +  H        AME A  +E L N+ LL++H VA    DP +  F+E   L +QV+ + +++ Y++ LR +G
Sbjct:   40 YFDRDDVAQENFKRFFLTKSHNCQTSAEMFMHLQNKRGGCISLQDIARPERDSWHG----GFQAMECAFHMEMLINQSLLNMHEVAKEKGDPHLCHFLEQNCLDQQVDILKEMSGYLTNLRQMG 159          
The following BLAST results are available for this feature:
BLAST of CN181550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRIL_FELCA1.571e-1334.71Ferritin light chain OS=Felis catus GN=FTL PE=2 SV... [more]
FRIL_BOVIN1.571e-1332.14Ferritin light chain OS=Bos taurus GN=FTL PE=2 SV=... [more]
FRIH_PIG1.571e-1335.48Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV... [more]
FRIL2_MOUSE2.052e-1332.52Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=... [more]
FTMT_BOVIN3.500e-1334.68Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2... [more]
FTMT_MOUSE5.971e-1336.29Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE... [more]
FHL17_MOUSE2.963e-1232.26Ferritin heavy polypeptide-like 17 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B20_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181550 ID=CN181550; Name=CN181550; organism=Citrus sinensis; type=EST; length=750bp
GAACTTTTATTGAACAACTTAATTATATTTATACAATCAGAAGATGGATT
TGGTGCTCTGCTTAAACTATTAGATCCCTTCACACAGTCTGTTACTAAAT
AAAGAAAAAGCACCATCAAAAAGACTATCTAAATGCGACCACACTAATAT
GATAAAGCAAGGAGGCTATTGAGTATTAACTTTGTAGGACTTAACACTGT
TTCAGCTTATTTTTTGTCAACACACTCAACCTCCTGTGGCAGAGATACTT
CAGAACATTTGGCAGAAAAGAGTTGACTAAAGCACAAAGAAATGTAACAA
TATGGTTCTTCATCATGCAGCATCACCCTCGTGGAGAAGCATTTGATCGA
AGTGCCATAATCCGTGGCCTTTCCCAACCATCCTCAGTTGAGAAACATAT
TTTGCGATCTTGTTAATTGCTTCAACCTGCTCACCCAAAAATTCACTCTC
GACAAACTCTGCCATTTGGGGATCATTGTTTCTATCCGCCACACTGTGCA
GGCTCAGAAGCTTCTCGTTTGTTAGCTTCTCCAGGGACAATGCTAGTTCC
ATTGCATACAAGGCATCCCCTTTCTCCGCATGATCAAACTCCGAAGGGGG
CTGCATTATGGAGTGCAGTTTTACTTTTCCACCGCGCAAGTTCTGATACT
CCATAAACTTCTCAGCATGTTCCCTTTCTTCTTCACTGGACTCCTTGAAA
AATTTGGCAAGGCCTCTCAGAGCAATATTATCCCGATCAAAGTACGCATA
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